Gene : AT5G47890 A. thaliana TAIR10
Defline:  (1 of 1) K03946 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (NDUFA2) Genomic Order:  4183
Name:  ? AT5G47890 Secondary Identifier:  ? PAC:19669952
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47890 0.5kb upstream 0.5kb upstream 2393 true Chr5: 19388237-19390629 Arabidopsis thaliana
AT5G47890 0.5kb upstream 0.5kb upstream 500 false Chr5: 19388237-19388736 Arabidopsis thaliana
AT5G47890 0.5kb downstream 0.5kb downstream 2393 true Chr5: 19388737-19391129 Arabidopsis thaliana
AT5G47890 0.5kb downstream 0.5kb downstream 500 false Chr5: 19390630-19391129 Arabidopsis thaliana
AT5G47890 1.0kb upstream 1.0kb upstream 2893 true Chr5: 19387737-19390629 Arabidopsis thaliana
AT5G47890 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19387737-19388736 Arabidopsis thaliana
AT5G47890 1.0kb downstream 1.0kb downstream 2893 true Chr5: 19388737-19391629 Arabidopsis thaliana
AT5G47890 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19390630-19391629 Arabidopsis thaliana
AT5G47890 2.0kb upstream 2.0kb upstream 3893 true Chr5: 19386737-19390629 Arabidopsis thaliana
AT5G47890 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19386737-19388736 Arabidopsis thaliana
AT5G47890 2.0kb downstream 2.0kb downstream 3893 true Chr5: 19388737-19392629 Arabidopsis thaliana
AT5G47890 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19390630-19392629 Arabidopsis thaliana
AT5G47890 5.0kb upstream 5.0kb upstream 6893 true Chr5: 19383737-19390629 Arabidopsis thaliana
AT5G47890 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19383737-19388736 Arabidopsis thaliana
AT5G47890 5.0kb downstream 5.0kb downstream 6893 true Chr5: 19388737-19395629 Arabidopsis thaliana
AT5G47890 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19390630-19395629 Arabidopsis thaliana
AT5G47890 10.0kb upstream 10.0kb upstream 11893 true Chr5: 19378737-19390629 Arabidopsis thaliana
AT5G47890 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19378737-19388736 Arabidopsis thaliana
AT5G47890 10.0kb downstream 10.0kb downstream 11893 true Chr5: 19388737-19400629 Arabidopsis thaliana
AT5G47890 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19390630-19400629 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365526 5261 Brassicaceae View MSA
123835089 5264 Brassicales-Malvales View MSA
124344555 5266 SBM View MSA
124239855 5268 Malvidae View MSA
124068436 5270 Rosid View MSA
123739674 5271 Pentapetalae View MSA
122788526 5272 Eudicot View MSA
122045134 5273 Angiosperm View MSA
121343920 5274 Embryophyte View MSA
123424630 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.837     High  
cufflinks 50.139     High High
cufflinks 32.093     High  
cufflinks 46.599     High  
cufflinks 31.4     High  
cufflinks 46.203     High  

0 Strain