Gene : HSD6 A. thaliana TAIR10
Primary Identifier:  ? AT5G50770 Defline:  (1 of 1) PTHR24322:SF419 - 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6
Genomic Order:  4503 Name:  ? AT5G50770
Secondary Identifier:  ? PAC:19665274
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50770 0.5kb upstream 0.5kb upstream 2546 true Chr5: 20646680-20649225 Arabidopsis thaliana
AT5G50770 0.5kb upstream 0.5kb upstream 500 false Chr5: 20648726-20649225 Arabidopsis thaliana
AT5G50770 0.5kb downstream 0.5kb downstream 2546 true Chr5: 20646180-20648725 Arabidopsis thaliana
AT5G50770 0.5kb downstream 0.5kb downstream 500 false Chr5: 20646180-20646679 Arabidopsis thaliana
AT5G50770 1.0kb upstream 1.0kb upstream 3046 true Chr5: 20646680-20649725 Arabidopsis thaliana
AT5G50770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20648726-20649725 Arabidopsis thaliana
AT5G50770 1.0kb downstream 1.0kb downstream 3046 true Chr5: 20645680-20648725 Arabidopsis thaliana
AT5G50770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20645680-20646679 Arabidopsis thaliana
AT5G50770 2.0kb upstream 2.0kb upstream 4046 true Chr5: 20646680-20650725 Arabidopsis thaliana
AT5G50770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20648726-20650725 Arabidopsis thaliana
AT5G50770 2.0kb downstream 2.0kb downstream 4046 true Chr5: 20644680-20648725 Arabidopsis thaliana
AT5G50770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20644680-20646679 Arabidopsis thaliana
AT5G50770 5.0kb upstream 5.0kb upstream 7046 true Chr5: 20646680-20653725 Arabidopsis thaliana
AT5G50770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20648726-20653725 Arabidopsis thaliana
AT5G50770 5.0kb downstream 5.0kb downstream 7046 true Chr5: 20641680-20648725 Arabidopsis thaliana
AT5G50770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20641680-20646679 Arabidopsis thaliana
AT5G50770 10.0kb upstream 10.0kb upstream 12046 true Chr5: 20646680-20658725 Arabidopsis thaliana
AT5G50770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20648726-20658725 Arabidopsis thaliana
AT5G50770 10.0kb downstream 10.0kb downstream 12046 true Chr5: 20636680-20648725 Arabidopsis thaliana
AT5G50770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20636680-20646679 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379101 5261 Brassicaceae View MSA
123837564 5264 Brassicales-Malvales View MSA
124351612 5266 SBM View MSA
124248026 5268 Malvidae View MSA
124071912 5270 Rosid View MSA
123743335 5271 Pentapetalae View MSA
122796337 5272 Eudicot View MSA
122047684 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121345666 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain