Gene : AT5G50840 A. thaliana TAIR10
Defline:  (1 of 1) PTHR16127 - TAXILIN Genomic Order:  4511
Name:  ? AT5G50840 Secondary Identifier:  ? PAC:19671248
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50840 0.5kb upstream 0.5kb upstream 3599 true Chr5: 20685320-20688918 Arabidopsis thaliana
AT5G50840 0.5kb upstream 0.5kb upstream 500 false Chr5: 20685320-20685819 Arabidopsis thaliana
AT5G50840 0.5kb downstream 0.5kb downstream 3599 true Chr5: 20685820-20689418 Arabidopsis thaliana
AT5G50840 0.5kb downstream 0.5kb downstream 500 false Chr5: 20688919-20689418 Arabidopsis thaliana
AT5G50840 1.0kb upstream 1.0kb upstream 4099 true Chr5: 20684820-20688918 Arabidopsis thaliana
AT5G50840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20684820-20685819 Arabidopsis thaliana
AT5G50840 1.0kb downstream 1.0kb downstream 4099 true Chr5: 20685820-20689918 Arabidopsis thaliana
AT5G50840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20688919-20689918 Arabidopsis thaliana
AT5G50840 2.0kb upstream 2.0kb upstream 5099 true Chr5: 20683820-20688918 Arabidopsis thaliana
AT5G50840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20683820-20685819 Arabidopsis thaliana
AT5G50840 2.0kb downstream 2.0kb downstream 5099 true Chr5: 20685820-20690918 Arabidopsis thaliana
AT5G50840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20688919-20690918 Arabidopsis thaliana
AT5G50840 5.0kb upstream 5.0kb upstream 8099 true Chr5: 20680820-20688918 Arabidopsis thaliana
AT5G50840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20680820-20685819 Arabidopsis thaliana
AT5G50840 5.0kb downstream 5.0kb downstream 8099 true Chr5: 20685820-20693918 Arabidopsis thaliana
AT5G50840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20688919-20693918 Arabidopsis thaliana
AT5G50840 10.0kb upstream 10.0kb upstream 13099 true Chr5: 20675820-20688918 Arabidopsis thaliana
AT5G50840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20675820-20685819 Arabidopsis thaliana
AT5G50840 10.0kb downstream 10.0kb downstream 13099 true Chr5: 20685820-20698918 Arabidopsis thaliana
AT5G50840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20688919-20698918 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363821 5261 Brassicaceae View MSA
123833050 5264 Brassicales-Malvales View MSA
124337614 5266 SBM View MSA
124237733 5268 Malvidae View MSA
124064833 5270 Rosid View MSA
123742164 5271 Pentapetalae View MSA
122790090 5272 Eudicot View MSA
122042784 5273 Angiosperm View MSA
121348664 5274 Embryophyte View MSA
123425640 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.934        
cufflinks 3.573        
cufflinks 2.563       Low
cufflinks 3.784        
cufflinks 2.86        
cufflinks 3.936       High

0 Strain