Gene : AT5G50530 A. thaliana TAIR10
Defline:  (1 of 3) PTHR13780//PTHR13780:SF45 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED Genomic Order:  4476
Name:  ? AT5G50530 Secondary Identifier:  ? PAC:19667401
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50530 0.5kb upstream 0.5kb upstream 4070 true Chr5: 20571681-20575750 Arabidopsis thaliana
AT5G50530 0.5kb upstream 0.5kb upstream 500 false Chr5: 20575251-20575750 Arabidopsis thaliana
AT5G50530 0.5kb downstream 0.5kb downstream 4070 true Chr5: 20571181-20575250 Arabidopsis thaliana
AT5G50530 0.5kb downstream 0.5kb downstream 500 false Chr5: 20571181-20571680 Arabidopsis thaliana
AT5G50530 1.0kb upstream 1.0kb upstream 4570 true Chr5: 20571681-20576250 Arabidopsis thaliana
AT5G50530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20575251-20576250 Arabidopsis thaliana
AT5G50530 1.0kb downstream 1.0kb downstream 4570 true Chr5: 20570681-20575250 Arabidopsis thaliana
AT5G50530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20570681-20571680 Arabidopsis thaliana
AT5G50530 2.0kb upstream 2.0kb upstream 5570 true Chr5: 20571681-20577250 Arabidopsis thaliana
AT5G50530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20575251-20577250 Arabidopsis thaliana
AT5G50530 2.0kb downstream 2.0kb downstream 5570 true Chr5: 20569681-20575250 Arabidopsis thaliana
AT5G50530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20569681-20571680 Arabidopsis thaliana
AT5G50530 5.0kb upstream 5.0kb upstream 8570 true Chr5: 20571681-20580250 Arabidopsis thaliana
AT5G50530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20575251-20580250 Arabidopsis thaliana
AT5G50530 5.0kb downstream 5.0kb downstream 8570 true Chr5: 20566681-20575250 Arabidopsis thaliana
AT5G50530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20566681-20571680 Arabidopsis thaliana
AT5G50530 10.0kb upstream 10.0kb upstream 13570 true Chr5: 20571681-20585250 Arabidopsis thaliana
AT5G50530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20575251-20585250 Arabidopsis thaliana
AT5G50530 10.0kb downstream 10.0kb downstream 13570 true Chr5: 20561681-20575250 Arabidopsis thaliana
AT5G50530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20561681-20571680 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369507 5261 Brassicaceae View MSA
123838293 5264 Brassicales-Malvales View MSA
124337275 5266 SBM View MSA
124251631 5268 Malvidae View MSA
124062366 5270 Rosid View MSA
123744247 5271 Pentapetalae View MSA
122790743 5272 Eudicot View MSA
122042144 5273 Angiosperm View MSA
121349998 5274 Embryophyte View MSA
123381535 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain