Gene : AT5G50420 A. thaliana TAIR10
Defline:  (1 of 3) K03691 - peptide-O-fucosyltransferase (POFUT) Genomic Order:  4464
Name:  ? AT5G50420 Secondary Identifier:  ? PAC:19667864
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50420 0.5kb upstream 0.5kb upstream 3151 true Chr5: 20530206-20533356 Arabidopsis thaliana
AT5G50420 0.5kb upstream 0.5kb upstream 500 false Chr5: 20532857-20533356 Arabidopsis thaliana
AT5G50420 0.5kb downstream 0.5kb downstream 3151 true Chr5: 20529706-20532856 Arabidopsis thaliana
AT5G50420 0.5kb downstream 0.5kb downstream 500 false Chr5: 20529706-20530205 Arabidopsis thaliana
AT5G50420 1.0kb upstream 1.0kb upstream 3651 true Chr5: 20530206-20533856 Arabidopsis thaliana
AT5G50420 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20532857-20533856 Arabidopsis thaliana
AT5G50420 1.0kb downstream 1.0kb downstream 3651 true Chr5: 20529206-20532856 Arabidopsis thaliana
AT5G50420 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20529206-20530205 Arabidopsis thaliana
AT5G50420 2.0kb upstream 2.0kb upstream 4651 true Chr5: 20530206-20534856 Arabidopsis thaliana
AT5G50420 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20532857-20534856 Arabidopsis thaliana
AT5G50420 2.0kb downstream 2.0kb downstream 4651 true Chr5: 20528206-20532856 Arabidopsis thaliana
AT5G50420 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20528206-20530205 Arabidopsis thaliana
AT5G50420 5.0kb upstream 5.0kb upstream 7651 true Chr5: 20530206-20537856 Arabidopsis thaliana
AT5G50420 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20532857-20537856 Arabidopsis thaliana
AT5G50420 5.0kb downstream 5.0kb downstream 7651 true Chr5: 20525206-20532856 Arabidopsis thaliana
AT5G50420 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20525206-20530205 Arabidopsis thaliana
AT5G50420 10.0kb upstream 10.0kb upstream 12651 true Chr5: 20530206-20542856 Arabidopsis thaliana
AT5G50420 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20532857-20542856 Arabidopsis thaliana
AT5G50420 10.0kb downstream 10.0kb downstream 12651 true Chr5: 20520206-20532856 Arabidopsis thaliana
AT5G50420 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20520206-20530205 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371173 5261 Brassicaceae View MSA
123833404 5264 Brassicales-Malvales View MSA
124344385 5266 SBM View MSA
124236938 5268 Malvidae View MSA
124067328 5270 Rosid View MSA
123742229 5271 Pentapetalae View MSA
122789958 5272 Eudicot View MSA
122047724 5273 Angiosperm View MSA
121348128 5274 Embryophyte View MSA
123380736 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.011        
cufflinks 10.502        
cufflinks 7.615        
cufflinks 9.38        
cufflinks 5.68       Low
cufflinks 13.391       High

0 Strain