Gene : AT5G50110 A. thaliana TAIR10
Defline:  (1 of 1) 2.1.1.170 - 16S rRNA (guanine(527)-N(7))-methyltransferase Genomic Order:  4427
Name:  ? AT5G50110 Secondary Identifier:  ? PAC:19665278
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50110 0.5kb upstream 0.5kb upstream 3193 true Chr5: 20373015-20376207 Arabidopsis thaliana
AT5G50110 0.5kb upstream 0.5kb upstream 500 false Chr5: 20373015-20373514 Arabidopsis thaliana
AT5G50110 0.5kb downstream 0.5kb downstream 3193 true Chr5: 20373515-20376707 Arabidopsis thaliana
AT5G50110 0.5kb downstream 0.5kb downstream 500 false Chr5: 20376208-20376707 Arabidopsis thaliana
AT5G50110 1.0kb upstream 1.0kb upstream 3693 true Chr5: 20372515-20376207 Arabidopsis thaliana
AT5G50110 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20372515-20373514 Arabidopsis thaliana
AT5G50110 1.0kb downstream 1.0kb downstream 3693 true Chr5: 20373515-20377207 Arabidopsis thaliana
AT5G50110 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20376208-20377207 Arabidopsis thaliana
AT5G50110 2.0kb upstream 2.0kb upstream 4693 true Chr5: 20371515-20376207 Arabidopsis thaliana
AT5G50110 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20371515-20373514 Arabidopsis thaliana
AT5G50110 2.0kb downstream 2.0kb downstream 4693 true Chr5: 20373515-20378207 Arabidopsis thaliana
AT5G50110 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20376208-20378207 Arabidopsis thaliana
AT5G50110 5.0kb upstream 5.0kb upstream 7693 true Chr5: 20368515-20376207 Arabidopsis thaliana
AT5G50110 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20368515-20373514 Arabidopsis thaliana
AT5G50110 5.0kb downstream 5.0kb downstream 7693 true Chr5: 20373515-20381207 Arabidopsis thaliana
AT5G50110 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20376208-20381207 Arabidopsis thaliana
AT5G50110 10.0kb upstream 10.0kb upstream 12693 true Chr5: 20363515-20376207 Arabidopsis thaliana
AT5G50110 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20363515-20373514 Arabidopsis thaliana
AT5G50110 10.0kb downstream 10.0kb downstream 12693 true Chr5: 20373515-20386207 Arabidopsis thaliana
AT5G50110 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20376208-20386207 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379102 5261 Brassicaceae View MSA
123835275 5264 Brassicales-Malvales View MSA
124348091 5266 SBM View MSA
124239529 5268 Malvidae View MSA
124063822 5270 Rosid View MSA
123747050 5271 Pentapetalae View MSA
122788459 5272 Eudicot View MSA
122046579 5273 Angiosperm View MSA
121348098 5274 Embryophyte View MSA
123428344 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.41        
cufflinks 2.015        
cufflinks 3.956        
cufflinks 1.925        
cufflinks 4.095       High
cufflinks 1.818       Low

0 Strain