Gene : AT5G49990 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11119:SF48 - NUCLEOBASE-ASCORBATE TRANSPORTER 5-RELATED Genomic Order:  4413
Name:  ? AT5G49990 Secondary Identifier:  ? PAC:19666347
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49990 0.5kb upstream 0.5kb upstream 4741 true Chr5: 20337641-20342381 Arabidopsis thaliana
AT5G49990 0.5kb upstream 0.5kb upstream 500 false Chr5: 20341882-20342381 Arabidopsis thaliana
AT5G49990 0.5kb downstream 0.5kb downstream 4741 true Chr5: 20337141-20341881 Arabidopsis thaliana
AT5G49990 0.5kb downstream 0.5kb downstream 500 false Chr5: 20337141-20337640 Arabidopsis thaliana
AT5G49990 1.0kb upstream 1.0kb upstream 5241 true Chr5: 20337641-20342881 Arabidopsis thaliana
AT5G49990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20341882-20342881 Arabidopsis thaliana
AT5G49990 1.0kb downstream 1.0kb downstream 5241 true Chr5: 20336641-20341881 Arabidopsis thaliana
AT5G49990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20336641-20337640 Arabidopsis thaliana
AT5G49990 2.0kb upstream 2.0kb upstream 6241 true Chr5: 20337641-20343881 Arabidopsis thaliana
AT5G49990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20341882-20343881 Arabidopsis thaliana
AT5G49990 2.0kb downstream 2.0kb downstream 6241 true Chr5: 20335641-20341881 Arabidopsis thaliana
AT5G49990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20335641-20337640 Arabidopsis thaliana
AT5G49990 5.0kb upstream 5.0kb upstream 9241 true Chr5: 20337641-20346881 Arabidopsis thaliana
AT5G49990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20341882-20346881 Arabidopsis thaliana
AT5G49990 5.0kb downstream 5.0kb downstream 9241 true Chr5: 20332641-20341881 Arabidopsis thaliana
AT5G49990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20332641-20337640 Arabidopsis thaliana
AT5G49990 10.0kb upstream 10.0kb upstream 14241 true Chr5: 20337641-20351881 Arabidopsis thaliana
AT5G49990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20341882-20351881 Arabidopsis thaliana
AT5G49990 10.0kb downstream 10.0kb downstream 14241 true Chr5: 20327641-20341881 Arabidopsis thaliana
AT5G49990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20327641-20337640 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510317 5273 Angiosperm View MSA
122361890 5261 Brassicaceae View MSA
123798268 5264 Brassicales-Malvales View MSA
124295932 5266 SBM View MSA
124148235 5268 Malvidae View MSA
123874274 5270 Rosid View MSA
123458275 5271 Pentapetalae View MSA
122493681 5272 Eudicot View MSA
120783421 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.679        
cufflinks 12.554        
cufflinks 3.447       Low
cufflinks 15.582       High
cufflinks 3.501       Low
cufflinks 12.138        

0 Strain