Gene : cpHsc70-2 A. thaliana TAIR10
Primary Identifier:  ? AT5G49910 Defline:  (1 of 2) PTHR19375//PTHR19375:SF204 - HEAT SHOCK PROTEIN 70KDA // HEAT SHOCK 70 KDA PROTEIN 6, CHLOROPLASTIC-RELATED
Genomic Order:  4404 Name:  ? AT5G49910
Secondary Identifier:  ? PAC:19669815
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49910 0.5kb upstream 0.5kb upstream 3556 true Chr5: 20302914-20306469 Arabidopsis thaliana
AT5G49910 0.5kb upstream 0.5kb upstream 500 false Chr5: 20302914-20303413 Arabidopsis thaliana
AT5G49910 0.5kb downstream 0.5kb downstream 3556 true Chr5: 20303414-20306969 Arabidopsis thaliana
AT5G49910 0.5kb downstream 0.5kb downstream 500 false Chr5: 20306470-20306969 Arabidopsis thaliana
AT5G49910 1.0kb upstream 1.0kb upstream 4056 true Chr5: 20302414-20306469 Arabidopsis thaliana
AT5G49910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20302414-20303413 Arabidopsis thaliana
AT5G49910 1.0kb downstream 1.0kb downstream 4056 true Chr5: 20303414-20307469 Arabidopsis thaliana
AT5G49910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20306470-20307469 Arabidopsis thaliana
AT5G49910 2.0kb upstream 2.0kb upstream 5056 true Chr5: 20301414-20306469 Arabidopsis thaliana
AT5G49910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20301414-20303413 Arabidopsis thaliana
AT5G49910 2.0kb downstream 2.0kb downstream 5056 true Chr5: 20303414-20308469 Arabidopsis thaliana
AT5G49910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20306470-20308469 Arabidopsis thaliana
AT5G49910 5.0kb upstream 5.0kb upstream 8056 true Chr5: 20298414-20306469 Arabidopsis thaliana
AT5G49910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20298414-20303413 Arabidopsis thaliana
AT5G49910 5.0kb downstream 5.0kb downstream 8056 true Chr5: 20303414-20311469 Arabidopsis thaliana
AT5G49910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20306470-20311469 Arabidopsis thaliana
AT5G49910 10.0kb upstream 10.0kb upstream 13056 true Chr5: 20293414-20306469 Arabidopsis thaliana
AT5G49910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20293414-20303413 Arabidopsis thaliana
AT5G49910 10.0kb downstream 10.0kb downstream 13056 true Chr5: 20303414-20316469 Arabidopsis thaliana
AT5G49910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20306470-20316469 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343357 5261 Brassicaceae View MSA
123841703 5264 Brassicales-Malvales View MSA
124339714 5266 SBM View MSA
124251993 5268 Malvidae View MSA
124064734 5270 Rosid View MSA
123747675 5271 Pentapetalae View MSA
122793873 5272 Eudicot View MSA
122046193 5273 Angiosperm View MSA
121347637 5274 Embryophyte View MSA
123424086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.235     High High
cufflinks 32.461     High Low
cufflinks 88.114     High  
cufflinks 37.771     High  
cufflinks 57.724     High  
cufflinks 44.344     High  

0 Strain