Gene : AT5G49945 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12883 - ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED Genomic Order:  4408
Name:  ? AT5G49945 Secondary Identifier:  ? PAC:19671350
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49945 0.5kb upstream 0.5kb upstream 2926 true Chr5: 20316905-20319830 Arabidopsis thaliana
AT5G49945 0.5kb upstream 0.5kb upstream 500 false Chr5: 20316905-20317404 Arabidopsis thaliana
AT5G49945 0.5kb downstream 0.5kb downstream 2926 true Chr5: 20317405-20320330 Arabidopsis thaliana
AT5G49945 0.5kb downstream 0.5kb downstream 500 false Chr5: 20319831-20320330 Arabidopsis thaliana
AT5G49945 1.0kb upstream 1.0kb upstream 3426 true Chr5: 20316405-20319830 Arabidopsis thaliana
AT5G49945 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20316405-20317404 Arabidopsis thaliana
AT5G49945 1.0kb downstream 1.0kb downstream 3426 true Chr5: 20317405-20320830 Arabidopsis thaliana
AT5G49945 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20319831-20320830 Arabidopsis thaliana
AT5G49945 2.0kb upstream 2.0kb upstream 4426 true Chr5: 20315405-20319830 Arabidopsis thaliana
AT5G49945 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20315405-20317404 Arabidopsis thaliana
AT5G49945 2.0kb downstream 2.0kb downstream 4426 true Chr5: 20317405-20321830 Arabidopsis thaliana
AT5G49945 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20319831-20321830 Arabidopsis thaliana
AT5G49945 5.0kb upstream 5.0kb upstream 7426 true Chr5: 20312405-20319830 Arabidopsis thaliana
AT5G49945 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20312405-20317404 Arabidopsis thaliana
AT5G49945 5.0kb downstream 5.0kb downstream 7426 true Chr5: 20317405-20324830 Arabidopsis thaliana
AT5G49945 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20319831-20324830 Arabidopsis thaliana
AT5G49945 10.0kb upstream 10.0kb upstream 12426 true Chr5: 20307405-20319830 Arabidopsis thaliana
AT5G49945 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20307405-20317404 Arabidopsis thaliana
AT5G49945 10.0kb downstream 10.0kb downstream 12426 true Chr5: 20317405-20329830 Arabidopsis thaliana
AT5G49945 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20319831-20329830 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366851 5261 Brassicaceae View MSA
123799256 5264 Brassicales-Malvales View MSA
124296800 5266 SBM View MSA
124148852 5268 Malvidae View MSA
124060928 5270 Rosid View MSA
123741655 5271 Pentapetalae View MSA
122791867 5272 Eudicot View MSA
122041850 5273 Angiosperm View MSA
121347290 5274 Embryophyte View MSA
123428822 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.825       Low
cufflinks 11.708        
cufflinks 8.297        
cufflinks 11.89        
cufflinks 7.863        
cufflinks 11.723        

0 Strain