Gene : EXO84B A. thaliana TAIR10
Primary Identifier:  ? AT5G49830 Defline:  (1 of 2) PTHR21426:SF15 - EXOCYST COMPLEX COMPONENT EXO84A
Genomic Order:  4396 Name:  ? AT5G49830
Secondary Identifier:  ? PAC:19668898
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49830 0.5kb upstream 0.5kb upstream 5054 true Chr5: 20250486-20255539 Arabidopsis thaliana
AT5G49830 0.5kb upstream 0.5kb upstream 500 false Chr5: 20255040-20255539 Arabidopsis thaliana
AT5G49830 0.5kb downstream 0.5kb downstream 5054 true Chr5: 20249986-20255039 Arabidopsis thaliana
AT5G49830 0.5kb downstream 0.5kb downstream 500 false Chr5: 20249986-20250485 Arabidopsis thaliana
AT5G49830 1.0kb upstream 1.0kb upstream 5554 true Chr5: 20250486-20256039 Arabidopsis thaliana
AT5G49830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20255040-20256039 Arabidopsis thaliana
AT5G49830 1.0kb downstream 1.0kb downstream 5554 true Chr5: 20249486-20255039 Arabidopsis thaliana
AT5G49830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20249486-20250485 Arabidopsis thaliana
AT5G49830 2.0kb upstream 2.0kb upstream 6554 true Chr5: 20250486-20257039 Arabidopsis thaliana
AT5G49830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20255040-20257039 Arabidopsis thaliana
AT5G49830 2.0kb downstream 2.0kb downstream 6554 true Chr5: 20248486-20255039 Arabidopsis thaliana
AT5G49830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20248486-20250485 Arabidopsis thaliana
AT5G49830 5.0kb upstream 5.0kb upstream 9554 true Chr5: 20250486-20260039 Arabidopsis thaliana
AT5G49830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20255040-20260039 Arabidopsis thaliana
AT5G49830 5.0kb downstream 5.0kb downstream 9554 true Chr5: 20245486-20255039 Arabidopsis thaliana
AT5G49830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20245486-20250485 Arabidopsis thaliana
AT5G49830 10.0kb upstream 10.0kb upstream 14554 true Chr5: 20250486-20265039 Arabidopsis thaliana
AT5G49830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20255040-20265039 Arabidopsis thaliana
AT5G49830 10.0kb downstream 10.0kb downstream 14554 true Chr5: 20240486-20255039 Arabidopsis thaliana
AT5G49830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20240486-20250485 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365817 5261 Brassicaceae View MSA
123828984 5264 Brassicales-Malvales View MSA
124341107 5266 SBM View MSA
124241381 5268 Malvidae View MSA
124060874 5270 Rosid View MSA
123737879 5271 Pentapetalae View MSA
122792273 5272 Eudicot View MSA
122045768 5273 Angiosperm View MSA
121346078 5274 Embryophyte View MSA
123428165 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.605        
cufflinks 4.488        
cufflinks 3.526       Low
cufflinks 4.695        
cufflinks 3.812        
cufflinks 5.427       High

0 Strain