Gene : PNG1 A. thaliana TAIR10
Primary Identifier:  ? AT5G49570 Defline:  (1 of 1) K01456 - peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase (E3.5.1.52, NGLY1, PNG1)
Genomic Order:  4371 Name:  ? AT5G49570
Secondary Identifier:  ? PAC:19673221
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49570 0.5kb upstream 0.5kb upstream 4827 true Chr5: 20111859-20116685 Arabidopsis thaliana
AT5G49570 0.5kb upstream 0.5kb upstream 500 false Chr5: 20116186-20116685 Arabidopsis thaliana
AT5G49570 0.5kb downstream 0.5kb downstream 4827 true Chr5: 20111359-20116185 Arabidopsis thaliana
AT5G49570 0.5kb downstream 0.5kb downstream 500 false Chr5: 20111359-20111858 Arabidopsis thaliana
AT5G49570 1.0kb upstream 1.0kb upstream 5327 true Chr5: 20111859-20117185 Arabidopsis thaliana
AT5G49570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20116186-20117185 Arabidopsis thaliana
AT5G49570 1.0kb downstream 1.0kb downstream 5327 true Chr5: 20110859-20116185 Arabidopsis thaliana
AT5G49570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20110859-20111858 Arabidopsis thaliana
AT5G49570 2.0kb upstream 2.0kb upstream 6327 true Chr5: 20111859-20118185 Arabidopsis thaliana
AT5G49570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20116186-20118185 Arabidopsis thaliana
AT5G49570 2.0kb downstream 2.0kb downstream 6327 true Chr5: 20109859-20116185 Arabidopsis thaliana
AT5G49570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20109859-20111858 Arabidopsis thaliana
AT5G49570 5.0kb upstream 5.0kb upstream 9327 true Chr5: 20111859-20121185 Arabidopsis thaliana
AT5G49570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20116186-20121185 Arabidopsis thaliana
AT5G49570 5.0kb downstream 5.0kb downstream 9327 true Chr5: 20106859-20116185 Arabidopsis thaliana
AT5G49570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20106859-20111858 Arabidopsis thaliana
AT5G49570 10.0kb upstream 10.0kb upstream 14327 true Chr5: 20111859-20126185 Arabidopsis thaliana
AT5G49570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20116186-20126185 Arabidopsis thaliana
AT5G49570 10.0kb downstream 10.0kb downstream 14327 true Chr5: 20101859-20116185 Arabidopsis thaliana
AT5G49570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20101859-20111858 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368602 5261 Brassicaceae View MSA
123833077 5264 Brassicales-Malvales View MSA
124343558 5266 SBM View MSA
124245270 5268 Malvidae View MSA
124067325 5270 Rosid View MSA
123748709 5271 Pentapetalae View MSA
122792464 5272 Eudicot View MSA
122051116 5273 Angiosperm View MSA
121344308 5274 Embryophyte View MSA
123425533 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.052       High
cufflinks 7.484        
cufflinks 6.647       Low
cufflinks 8.325        
cufflinks 9.197        
cufflinks 7.921        

0 Strain