Gene : AT5G49470 A. thaliana TAIR10
Defline:  (1 of 1) PF00069//PF00989//PF07714//PF13426 - Protein kinase domain (Pkinase) // PAS fold (PAS) // Protein tyrosine kinase (Pkinase_Tyr) // PAS domain (PAS_9) Genomic Order:  4359
Name:  ? AT5G49470 Secondary Identifier:  ? PAC:19668732
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49470 0.5kb upstream 0.5kb upstream 5718 true Chr5: 20062948-20068665 Arabidopsis thaliana
AT5G49470 0.5kb upstream 0.5kb upstream 500 false Chr5: 20062948-20063447 Arabidopsis thaliana
AT5G49470 0.5kb downstream 0.5kb downstream 5718 true Chr5: 20063448-20069165 Arabidopsis thaliana
AT5G49470 0.5kb downstream 0.5kb downstream 500 false Chr5: 20068666-20069165 Arabidopsis thaliana
AT5G49470 1.0kb upstream 1.0kb upstream 6218 true Chr5: 20062448-20068665 Arabidopsis thaliana
AT5G49470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20062448-20063447 Arabidopsis thaliana
AT5G49470 1.0kb downstream 1.0kb downstream 6218 true Chr5: 20063448-20069665 Arabidopsis thaliana
AT5G49470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20068666-20069665 Arabidopsis thaliana
AT5G49470 2.0kb upstream 2.0kb upstream 7218 true Chr5: 20061448-20068665 Arabidopsis thaliana
AT5G49470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20061448-20063447 Arabidopsis thaliana
AT5G49470 2.0kb downstream 2.0kb downstream 7218 true Chr5: 20063448-20070665 Arabidopsis thaliana
AT5G49470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20068666-20070665 Arabidopsis thaliana
AT5G49470 5.0kb upstream 5.0kb upstream 10218 true Chr5: 20058448-20068665 Arabidopsis thaliana
AT5G49470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20058448-20063447 Arabidopsis thaliana
AT5G49470 5.0kb downstream 5.0kb downstream 10218 true Chr5: 20063448-20073665 Arabidopsis thaliana
AT5G49470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20068666-20073665 Arabidopsis thaliana
AT5G49470 10.0kb upstream 10.0kb upstream 15218 true Chr5: 20053448-20068665 Arabidopsis thaliana
AT5G49470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20053448-20063447 Arabidopsis thaliana
AT5G49470 10.0kb downstream 10.0kb downstream 15218 true Chr5: 20063448-20078665 Arabidopsis thaliana
AT5G49470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20068666-20078665 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374769 5261 Brassicaceae View MSA
123831662 5264 Brassicales-Malvales View MSA
124346407 5266 SBM View MSA
124242596 5268 Malvidae View MSA
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.041        
cufflinks 1.449        
cufflinks 0.97        
cufflinks 1.553       High
cufflinks 0.881       Low
cufflinks 1.309        

0 Strain