Gene : HRB1 A. thaliana TAIR10
Primary Identifier:  ? AT5G49230 Defline:  (1 of 2) PTHR31875:SF6 - PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4-RELATED
Genomic Order:  4333 Name:  ? AT5G49230
Secondary Identifier:  ? PAC:19669073
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G49230 0.5kb upstream 0.5kb upstream 2172 true Chr5: 19958873-19961044 Arabidopsis thaliana
AT5G49230 0.5kb upstream 0.5kb upstream 500 false Chr5: 19960545-19961044 Arabidopsis thaliana
AT5G49230 0.5kb downstream 0.5kb downstream 2172 true Chr5: 19958373-19960544 Arabidopsis thaliana
AT5G49230 0.5kb downstream 0.5kb downstream 500 false Chr5: 19958373-19958872 Arabidopsis thaliana
AT5G49230 1.0kb upstream 1.0kb upstream 2672 true Chr5: 19958873-19961544 Arabidopsis thaliana
AT5G49230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19960545-19961544 Arabidopsis thaliana
AT5G49230 1.0kb downstream 1.0kb downstream 2672 true Chr5: 19957873-19960544 Arabidopsis thaliana
AT5G49230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19957873-19958872 Arabidopsis thaliana
AT5G49230 2.0kb upstream 2.0kb upstream 3672 true Chr5: 19958873-19962544 Arabidopsis thaliana
AT5G49230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19960545-19962544 Arabidopsis thaliana
AT5G49230 2.0kb downstream 2.0kb downstream 3672 true Chr5: 19956873-19960544 Arabidopsis thaliana
AT5G49230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19956873-19958872 Arabidopsis thaliana
AT5G49230 5.0kb upstream 5.0kb upstream 6672 true Chr5: 19958873-19965544 Arabidopsis thaliana
AT5G49230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19960545-19965544 Arabidopsis thaliana
AT5G49230 5.0kb downstream 5.0kb downstream 6672 true Chr5: 19953873-19960544 Arabidopsis thaliana
AT5G49230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19953873-19958872 Arabidopsis thaliana
AT5G49230 10.0kb upstream 10.0kb upstream 11672 true Chr5: 19958873-19970544 Arabidopsis thaliana
AT5G49230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19960545-19970544 Arabidopsis thaliana
AT5G49230 10.0kb downstream 10.0kb downstream 11672 true Chr5: 19948873-19960544 Arabidopsis thaliana
AT5G49230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19948873-19958872 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378074 5261 Brassicaceae View MSA
123827566 5264 Brassicales-Malvales View MSA
124350196 5266 SBM View MSA
124249174 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.878        
cufflinks 13.719       High
cufflinks 8.136        
cufflinks 12.88        
cufflinks 7.794       Low
cufflinks 11.983        

0 Strain