Gene : MYB82 A. thaliana TAIR10
Primary Identifier:  ? AT5G52600 Defline:  (1 of 1) PTHR10641//PTHR10641:SF662 - MYB-LIKE DNA-BINDING PROTEIN MYB // TRANSCRIPTION FACTOR MYB82
Genomic Order:  4694 Name:  ? AT5G52600
Secondary Identifier:  ? PAC:19671212
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52600 0.5kb upstream 0.5kb upstream 1367 true Chr5: 21343102-21344468 Arabidopsis thaliana
AT5G52600 0.5kb upstream 0.5kb upstream 500 false Chr5: 21343969-21344468 Arabidopsis thaliana
AT5G52600 0.5kb downstream 0.5kb downstream 1367 true Chr5: 21342602-21343968 Arabidopsis thaliana
AT5G52600 0.5kb downstream 0.5kb downstream 500 false Chr5: 21342602-21343101 Arabidopsis thaliana
AT5G52600 1.0kb upstream 1.0kb upstream 1867 true Chr5: 21343102-21344968 Arabidopsis thaliana
AT5G52600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21343969-21344968 Arabidopsis thaliana
AT5G52600 1.0kb downstream 1.0kb downstream 1867 true Chr5: 21342102-21343968 Arabidopsis thaliana
AT5G52600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21342102-21343101 Arabidopsis thaliana
AT5G52600 2.0kb upstream 2.0kb upstream 2867 true Chr5: 21343102-21345968 Arabidopsis thaliana
AT5G52600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21343969-21345968 Arabidopsis thaliana
AT5G52600 2.0kb downstream 2.0kb downstream 2867 true Chr5: 21341102-21343968 Arabidopsis thaliana
AT5G52600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21341102-21343101 Arabidopsis thaliana
AT5G52600 5.0kb upstream 5.0kb upstream 5867 true Chr5: 21343102-21348968 Arabidopsis thaliana
AT5G52600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21343969-21348968 Arabidopsis thaliana
AT5G52600 5.0kb downstream 5.0kb downstream 5867 true Chr5: 21338102-21343968 Arabidopsis thaliana
AT5G52600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21338102-21343101 Arabidopsis thaliana
AT5G52600 10.0kb upstream 10.0kb upstream 10867 true Chr5: 21343102-21353968 Arabidopsis thaliana
AT5G52600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21343969-21353968 Arabidopsis thaliana
AT5G52600 10.0kb downstream 10.0kb downstream 10867 true Chr5: 21333102-21343968 Arabidopsis thaliana
AT5G52600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21333102-21343101 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377551 5261 Brassicaceae View MSA
123835388 5264 Brassicales-Malvales View MSA
124349769 5266 SBM View MSA
124252951 5268 Malvidae View MSA
124072001 5270 Rosid View MSA
123753736 5271 Pentapetalae View MSA
122796974 5272 Eudicot View MSA
122049924 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.77        
cufflinks 15.216        
cufflinks 0.322       Low
cufflinks 8.253        
cufflinks 0.593        
cufflinks 24.998       High

0 Strain