Gene : AT5G52530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR34536//PTHR34536:SF2 - FAMILY NOT NAMED // DENTIN SIALOPHOSPHOPROTEIN-RELATED PROTEIN Genomic Order:  4685
Name:  ? AT5G52530 Secondary Identifier:  ? PAC:19670756
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52530 0.5kb upstream 0.5kb upstream 4597 true Chr5: 21316640-21321236 Arabidopsis thaliana
AT5G52530 0.5kb upstream 0.5kb upstream 500 false Chr5: 21316640-21317139 Arabidopsis thaliana
AT5G52530 0.5kb downstream 0.5kb downstream 4597 true Chr5: 21317140-21321736 Arabidopsis thaliana
AT5G52530 0.5kb downstream 0.5kb downstream 500 false Chr5: 21321237-21321736 Arabidopsis thaliana
AT5G52530 1.0kb upstream 1.0kb upstream 5097 true Chr5: 21316140-21321236 Arabidopsis thaliana
AT5G52530 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21316140-21317139 Arabidopsis thaliana
AT5G52530 1.0kb downstream 1.0kb downstream 5097 true Chr5: 21317140-21322236 Arabidopsis thaliana
AT5G52530 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21321237-21322236 Arabidopsis thaliana
AT5G52530 2.0kb upstream 2.0kb upstream 6097 true Chr5: 21315140-21321236 Arabidopsis thaliana
AT5G52530 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21315140-21317139 Arabidopsis thaliana
AT5G52530 2.0kb downstream 2.0kb downstream 6097 true Chr5: 21317140-21323236 Arabidopsis thaliana
AT5G52530 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21321237-21323236 Arabidopsis thaliana
AT5G52530 5.0kb upstream 5.0kb upstream 9097 true Chr5: 21312140-21321236 Arabidopsis thaliana
AT5G52530 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21312140-21317139 Arabidopsis thaliana
AT5G52530 5.0kb downstream 5.0kb downstream 9097 true Chr5: 21317140-21326236 Arabidopsis thaliana
AT5G52530 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21321237-21326236 Arabidopsis thaliana
AT5G52530 10.0kb upstream 10.0kb upstream 14097 true Chr5: 21307140-21321236 Arabidopsis thaliana
AT5G52530 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21307140-21317139 Arabidopsis thaliana
AT5G52530 10.0kb downstream 10.0kb downstream 14097 true Chr5: 21317140-21331236 Arabidopsis thaliana
AT5G52530 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21321237-21331236 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343130 5261 Brassicaceae View MSA
123835474 5264 Brassicales-Malvales View MSA
124350855 5266 SBM View MSA
124245455 5268 Malvidae View MSA
124072035 5270 Rosid View MSA
123744728 5271 Pentapetalae View MSA
122794003 5272 Eudicot View MSA
122049698 5273 Angiosperm View MSA
121349594 5274 Embryophyte View MSA
123381369 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.134       High
cufflinks 8.127        
cufflinks 7.304       Low
cufflinks 9.646        
cufflinks 7.33       Low
cufflinks 8.724        

0 Strain