Gene : AT5G52370 A. thaliana TAIR10
Defline:  (1 of 2) PF16053 - Mitochondrial 28S ribosomal protein S34 (MRP-S34) Genomic Order:  4669
Name:  ? AT5G52370 Secondary Identifier:  ? PAC:19670028
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52370 0.5kb upstream 0.5kb upstream 1510 true Chr5: 21260278-21261787 Arabidopsis thaliana
AT5G52370 0.5kb upstream 0.5kb upstream 500 false Chr5: 21261288-21261787 Arabidopsis thaliana
AT5G52370 0.5kb downstream 0.5kb downstream 1510 true Chr5: 21259778-21261287 Arabidopsis thaliana
AT5G52370 0.5kb downstream 0.5kb downstream 500 false Chr5: 21259778-21260277 Arabidopsis thaliana
AT5G52370 1.0kb upstream 1.0kb upstream 2010 true Chr5: 21260278-21262287 Arabidopsis thaliana
AT5G52370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21261288-21262287 Arabidopsis thaliana
AT5G52370 1.0kb downstream 1.0kb downstream 2010 true Chr5: 21259278-21261287 Arabidopsis thaliana
AT5G52370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21259278-21260277 Arabidopsis thaliana
AT5G52370 2.0kb upstream 2.0kb upstream 3010 true Chr5: 21260278-21263287 Arabidopsis thaliana
AT5G52370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21261288-21263287 Arabidopsis thaliana
AT5G52370 2.0kb downstream 2.0kb downstream 3010 true Chr5: 21258278-21261287 Arabidopsis thaliana
AT5G52370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21258278-21260277 Arabidopsis thaliana
AT5G52370 5.0kb upstream 5.0kb upstream 6010 true Chr5: 21260278-21266287 Arabidopsis thaliana
AT5G52370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21261288-21266287 Arabidopsis thaliana
AT5G52370 5.0kb downstream 5.0kb downstream 6010 true Chr5: 21255278-21261287 Arabidopsis thaliana
AT5G52370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21255278-21260277 Arabidopsis thaliana
AT5G52370 10.0kb upstream 10.0kb upstream 11010 true Chr5: 21260278-21271287 Arabidopsis thaliana
AT5G52370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21261288-21271287 Arabidopsis thaliana
AT5G52370 10.0kb downstream 10.0kb downstream 11010 true Chr5: 21250278-21261287 Arabidopsis thaliana
AT5G52370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21250278-21260277 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379319 5261 Brassicaceae View MSA
123833765 5264 Brassicales-Malvales View MSA
124338993 5266 SBM View MSA
124241495 5268 Malvidae View MSA
124062726 5270 Rosid View MSA
123743415 5271 Pentapetalae View MSA
122794172 5272 Eudicot View MSA
122043343 5273 Angiosperm View MSA
121350318 5274 Embryophyte View MSA
123423853 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.493       Low
cufflinks 25.986       High
cufflinks 20.63        
cufflinks 24.478        
cufflinks 17.086       Low
cufflinks 21.78        

0 Strain