Gene : AT5G52450 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11206//PTHR11206:SF173 - MULTIDRUG RESISTANCE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4677
Name:  ? AT5G52450 Secondary Identifier:  ? PAC:19669220
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52450 0.5kb upstream 0.5kb upstream 3465 true Chr5: 21288898-21292362 Arabidopsis thaliana
AT5G52450 0.5kb upstream 0.5kb upstream 500 false Chr5: 21291863-21292362 Arabidopsis thaliana
AT5G52450 0.5kb downstream 0.5kb downstream 3465 true Chr5: 21288398-21291862 Arabidopsis thaliana
AT5G52450 0.5kb downstream 0.5kb downstream 500 false Chr5: 21288398-21288897 Arabidopsis thaliana
AT5G52450 1.0kb upstream 1.0kb upstream 3965 true Chr5: 21288898-21292862 Arabidopsis thaliana
AT5G52450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21291863-21292862 Arabidopsis thaliana
AT5G52450 1.0kb downstream 1.0kb downstream 3965 true Chr5: 21287898-21291862 Arabidopsis thaliana
AT5G52450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21287898-21288897 Arabidopsis thaliana
AT5G52450 2.0kb upstream 2.0kb upstream 4965 true Chr5: 21288898-21293862 Arabidopsis thaliana
AT5G52450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21291863-21293862 Arabidopsis thaliana
AT5G52450 2.0kb downstream 2.0kb downstream 4965 true Chr5: 21286898-21291862 Arabidopsis thaliana
AT5G52450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21286898-21288897 Arabidopsis thaliana
AT5G52450 5.0kb upstream 5.0kb upstream 7965 true Chr5: 21288898-21296862 Arabidopsis thaliana
AT5G52450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21291863-21296862 Arabidopsis thaliana
AT5G52450 5.0kb downstream 5.0kb downstream 7965 true Chr5: 21283898-21291862 Arabidopsis thaliana
AT5G52450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21283898-21288897 Arabidopsis thaliana
AT5G52450 10.0kb upstream 10.0kb upstream 12965 true Chr5: 21288898-21301862 Arabidopsis thaliana
AT5G52450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21291863-21301862 Arabidopsis thaliana
AT5G52450 10.0kb downstream 10.0kb downstream 12965 true Chr5: 21278898-21291862 Arabidopsis thaliana
AT5G52450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21278898-21288897 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370415 5261 Brassicaceae View MSA
123832872 5264 Brassicales-Malvales View MSA
124336882 5266 SBM View MSA
124250219 5268 Malvidae View MSA
124062797 5270 Rosid View MSA
123744234 5271 Pentapetalae View MSA
122796569 5272 Eudicot View MSA
122043980 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.529        
cufflinks 5.869        
cufflinks 14.318        
cufflinks 7.766        
cufflinks 19.347       High
cufflinks 3.659       Low

0 Strain