Gene : GB1 A. thaliana TAIR10
Primary Identifier:  ? AT5G52210 Defline:  (1 of 1) K07952 - ADP-ribosylation factor related protein 1 (ARFRP1)
Genomic Order:  4653 Name:  ? AT5G52210
Secondary Identifier:  ? PAC:19670864
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52210 0.5kb upstream 0.5kb upstream 2608 true Chr5: 21204491-21207098 Arabidopsis thaliana
AT5G52210 0.5kb upstream 0.5kb upstream 500 false Chr5: 21204491-21204990 Arabidopsis thaliana
AT5G52210 0.5kb downstream 0.5kb downstream 2608 true Chr5: 21204991-21207598 Arabidopsis thaliana
AT5G52210 0.5kb downstream 0.5kb downstream 500 false Chr5: 21207099-21207598 Arabidopsis thaliana
AT5G52210 1.0kb upstream 1.0kb upstream 3108 true Chr5: 21203991-21207098 Arabidopsis thaliana
AT5G52210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21203991-21204990 Arabidopsis thaliana
AT5G52210 1.0kb downstream 1.0kb downstream 3108 true Chr5: 21204991-21208098 Arabidopsis thaliana
AT5G52210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21207099-21208098 Arabidopsis thaliana
AT5G52210 2.0kb upstream 2.0kb upstream 4108 true Chr5: 21202991-21207098 Arabidopsis thaliana
AT5G52210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21202991-21204990 Arabidopsis thaliana
AT5G52210 2.0kb downstream 2.0kb downstream 4108 true Chr5: 21204991-21209098 Arabidopsis thaliana
AT5G52210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21207099-21209098 Arabidopsis thaliana
AT5G52210 5.0kb upstream 5.0kb upstream 7108 true Chr5: 21199991-21207098 Arabidopsis thaliana
AT5G52210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21199991-21204990 Arabidopsis thaliana
AT5G52210 5.0kb downstream 5.0kb downstream 7108 true Chr5: 21204991-21212098 Arabidopsis thaliana
AT5G52210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21207099-21212098 Arabidopsis thaliana
AT5G52210 10.0kb upstream 10.0kb upstream 12108 true Chr5: 21194991-21207098 Arabidopsis thaliana
AT5G52210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21194991-21204990 Arabidopsis thaliana
AT5G52210 10.0kb downstream 10.0kb downstream 12108 true Chr5: 21204991-21217098 Arabidopsis thaliana
AT5G52210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21207099-21217098 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376871 5261 Brassicaceae View MSA
123832402 5264 Brassicales-Malvales View MSA
124340773 5266 SBM View MSA
124245252 5268 Malvidae View MSA
124066511 5270 Rosid View MSA
123737941 5271 Pentapetalae View MSA
122789831 5272 Eudicot View MSA
122045512 5273 Angiosperm View MSA
121347621 5274 Embryophyte View MSA
123424811 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.998        
cufflinks 5.37        
cufflinks 3.27       Low
cufflinks 5.501        
cufflinks 3.618       Low
cufflinks 6.279       High

0 Strain