Gene : AT5G52020 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED Genomic Order:  4634
Name:  ? AT5G52020 Secondary Identifier:  ? PAC:19672767
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52020 0.5kb upstream 0.5kb upstream 1491 true Chr5: 21123958-21125448 Arabidopsis thaliana
AT5G52020 0.5kb upstream 0.5kb upstream 500 false Chr5: 21124949-21125448 Arabidopsis thaliana
AT5G52020 0.5kb downstream 0.5kb downstream 1491 true Chr5: 21123458-21124948 Arabidopsis thaliana
AT5G52020 0.5kb downstream 0.5kb downstream 500 false Chr5: 21123458-21123957 Arabidopsis thaliana
AT5G52020 1.0kb upstream 1.0kb upstream 1991 true Chr5: 21123958-21125948 Arabidopsis thaliana
AT5G52020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21124949-21125948 Arabidopsis thaliana
AT5G52020 1.0kb downstream 1.0kb downstream 1991 true Chr5: 21122958-21124948 Arabidopsis thaliana
AT5G52020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21122958-21123957 Arabidopsis thaliana
AT5G52020 2.0kb upstream 2.0kb upstream 2991 true Chr5: 21123958-21126948 Arabidopsis thaliana
AT5G52020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21124949-21126948 Arabidopsis thaliana
AT5G52020 2.0kb downstream 2.0kb downstream 2991 true Chr5: 21121958-21124948 Arabidopsis thaliana
AT5G52020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21121958-21123957 Arabidopsis thaliana
AT5G52020 5.0kb upstream 5.0kb upstream 5991 true Chr5: 21123958-21129948 Arabidopsis thaliana
AT5G52020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21124949-21129948 Arabidopsis thaliana
AT5G52020 5.0kb downstream 5.0kb downstream 5991 true Chr5: 21118958-21124948 Arabidopsis thaliana
AT5G52020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21118958-21123957 Arabidopsis thaliana
AT5G52020 10.0kb upstream 10.0kb upstream 10991 true Chr5: 21123958-21134948 Arabidopsis thaliana
AT5G52020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21124949-21134948 Arabidopsis thaliana
AT5G52020 10.0kb downstream 10.0kb downstream 10991 true Chr5: 21113958-21124948 Arabidopsis thaliana
AT5G52020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21113958-21123957 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368086 5261 Brassicaceae View MSA
123841266 5264 Brassicales-Malvales View MSA
124351280 5266 SBM View MSA
124251299 5268 Malvidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.246     Low  
cufflinks 209.344     High  
cufflinks 0.52        
cufflinks 109.779     High  
cufflinks 0.039     Low Low
cufflinks 133.078     High  

0 Strain