Gene : AT5G51880 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE Genomic Order:  4620
Name:  ? AT5G51880 Secondary Identifier:  ? PAC:19671279
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51880 0.5kb upstream 0.5kb upstream 2059 true Chr5: 21088883-21090941 Arabidopsis thaliana
AT5G51880 0.5kb upstream 0.5kb upstream 500 false Chr5: 21088883-21089382 Arabidopsis thaliana
AT5G51880 0.5kb downstream 0.5kb downstream 2059 true Chr5: 21089383-21091441 Arabidopsis thaliana
AT5G51880 0.5kb downstream 0.5kb downstream 500 false Chr5: 21090942-21091441 Arabidopsis thaliana
AT5G51880 1.0kb upstream 1.0kb upstream 2559 true Chr5: 21088383-21090941 Arabidopsis thaliana
AT5G51880 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21088383-21089382 Arabidopsis thaliana
AT5G51880 1.0kb downstream 1.0kb downstream 2559 true Chr5: 21089383-21091941 Arabidopsis thaliana
AT5G51880 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21090942-21091941 Arabidopsis thaliana
AT5G51880 2.0kb upstream 2.0kb upstream 3559 true Chr5: 21087383-21090941 Arabidopsis thaliana
AT5G51880 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21087383-21089382 Arabidopsis thaliana
AT5G51880 2.0kb downstream 2.0kb downstream 3559 true Chr5: 21089383-21092941 Arabidopsis thaliana
AT5G51880 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21090942-21092941 Arabidopsis thaliana
AT5G51880 5.0kb upstream 5.0kb upstream 6559 true Chr5: 21084383-21090941 Arabidopsis thaliana
AT5G51880 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21084383-21089382 Arabidopsis thaliana
AT5G51880 5.0kb downstream 5.0kb downstream 6559 true Chr5: 21089383-21095941 Arabidopsis thaliana
AT5G51880 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21090942-21095941 Arabidopsis thaliana
AT5G51880 10.0kb upstream 10.0kb upstream 11559 true Chr5: 21079383-21090941 Arabidopsis thaliana
AT5G51880 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21079383-21089382 Arabidopsis thaliana
AT5G51880 10.0kb downstream 10.0kb downstream 11559 true Chr5: 21089383-21100941 Arabidopsis thaliana
AT5G51880 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21090942-21100941 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374431 5261 Brassicaceae View MSA
123833084 5264 Brassicales-Malvales View MSA
124350769 5266 SBM View MSA
124238172 5268 Malvidae View MSA
124063510 5270 Rosid View MSA
123744389 5271 Pentapetalae View MSA
122789479 5272 Eudicot View MSA
122042956 5273 Angiosperm View MSA
121350444 5274 Embryophyte View MSA
123425265 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.411       High
cufflinks 13.166       Low
cufflinks 14.895        
cufflinks 14.852        
cufflinks 14.534        
cufflinks 14.283        

0 Strain