Gene : AT5G51960 A. thaliana TAIR10
Defline:  (1 of 2) PF13233 - Complex1_LYR-like (Complex1_LYR_2) Genomic Order:  4628
Name:  ? AT5G51960 Secondary Identifier:  ? PAC:19666070
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51960 0.5kb upstream 0.5kb upstream 1509 true Chr5: 21109840-21111348 Arabidopsis thaliana
AT5G51960 0.5kb upstream 0.5kb upstream 500 false Chr5: 21109840-21110339 Arabidopsis thaliana
AT5G51960 0.5kb downstream 0.5kb downstream 1509 true Chr5: 21110340-21111848 Arabidopsis thaliana
AT5G51960 0.5kb downstream 0.5kb downstream 500 false Chr5: 21111349-21111848 Arabidopsis thaliana
AT5G51960 1.0kb upstream 1.0kb upstream 2009 true Chr5: 21109340-21111348 Arabidopsis thaliana
AT5G51960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21109340-21110339 Arabidopsis thaliana
AT5G51960 1.0kb downstream 1.0kb downstream 2009 true Chr5: 21110340-21112348 Arabidopsis thaliana
AT5G51960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21111349-21112348 Arabidopsis thaliana
AT5G51960 2.0kb upstream 2.0kb upstream 3009 true Chr5: 21108340-21111348 Arabidopsis thaliana
AT5G51960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21108340-21110339 Arabidopsis thaliana
AT5G51960 2.0kb downstream 2.0kb downstream 3009 true Chr5: 21110340-21113348 Arabidopsis thaliana
AT5G51960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21111349-21113348 Arabidopsis thaliana
AT5G51960 5.0kb upstream 5.0kb upstream 6009 true Chr5: 21105340-21111348 Arabidopsis thaliana
AT5G51960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21105340-21110339 Arabidopsis thaliana
AT5G51960 5.0kb downstream 5.0kb downstream 6009 true Chr5: 21110340-21116348 Arabidopsis thaliana
AT5G51960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21111349-21116348 Arabidopsis thaliana
AT5G51960 10.0kb upstream 10.0kb upstream 11009 true Chr5: 21100340-21111348 Arabidopsis thaliana
AT5G51960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21100340-21110339 Arabidopsis thaliana
AT5G51960 10.0kb downstream 10.0kb downstream 11009 true Chr5: 21110340-21121348 Arabidopsis thaliana
AT5G51960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21111349-21121348 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364759 5261 Brassicaceae View MSA
123827887 5264 Brassicales-Malvales View MSA
124341092 5266 SBM View MSA
124250774 5268 Malvidae View MSA
124063359 5270 Rosid View MSA
123753617 5271 Pentapetalae View MSA
122788417 5272 Eudicot View MSA
122042390 5273 Angiosperm View MSA
121351633 5274 Embryophyte View MSA
123426034 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.955        
cufflinks 12.9        
cufflinks 12.441        
cufflinks 12.594        
cufflinks 9.787       Low
cufflinks 12.068        

0 Strain