Gene : GA20OX2 A. thaliana TAIR10
Primary Identifier:  ? AT5G51810 Defline:  (1 of 3) 1.14.11.12 - Gibberellin-44 dioxygenase / Gibberellin A44 oxidase
Genomic Order:  4611 Name:  ? AT5G51810
Secondary Identifier:  ? PAC:19670724
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5035 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51810 0.5kb upstream 0.5kb upstream 2121 true Chr5: 21055188-21057308 Arabidopsis thaliana
AT5G51810 0.5kb upstream 0.5kb upstream 500 false Chr5: 21056809-21057308 Arabidopsis thaliana
AT5G51810 0.5kb downstream 0.5kb downstream 2121 true Chr5: 21054688-21056808 Arabidopsis thaliana
AT5G51810 0.5kb downstream 0.5kb downstream 500 false Chr5: 21054688-21055187 Arabidopsis thaliana
AT5G51810 1.0kb upstream 1.0kb upstream 2621 true Chr5: 21055188-21057808 Arabidopsis thaliana
AT5G51810 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21056809-21057808 Arabidopsis thaliana
AT5G51810 1.0kb downstream 1.0kb downstream 2621 true Chr5: 21054188-21056808 Arabidopsis thaliana
AT5G51810 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21054188-21055187 Arabidopsis thaliana
AT5G51810 2.0kb upstream 2.0kb upstream 3621 true Chr5: 21055188-21058808 Arabidopsis thaliana
AT5G51810 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21056809-21058808 Arabidopsis thaliana
AT5G51810 2.0kb downstream 2.0kb downstream 3621 true Chr5: 21053188-21056808 Arabidopsis thaliana
AT5G51810 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21053188-21055187 Arabidopsis thaliana
AT5G51810 5.0kb upstream 5.0kb upstream 6621 true Chr5: 21055188-21061808 Arabidopsis thaliana
AT5G51810 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21056809-21061808 Arabidopsis thaliana
AT5G51810 5.0kb downstream 5.0kb downstream 6621 true Chr5: 21050188-21056808 Arabidopsis thaliana
AT5G51810 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21050188-21055187 Arabidopsis thaliana
AT5G51810 10.0kb upstream 10.0kb upstream 11621 true Chr5: 21055188-21066808 Arabidopsis thaliana
AT5G51810 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21056809-21066808 Arabidopsis thaliana
AT5G51810 10.0kb downstream 10.0kb downstream 11621 true Chr5: 21045188-21056808 Arabidopsis thaliana
AT5G51810 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21045188-21055187 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379646 5261 Brassicaceae View MSA
123802366 5264 Brassicales-Malvales View MSA
124299565 5266 SBM View MSA
124247790 5268 Malvidae View MSA
124071928 5270 Rosid View MSA
123748774 5271 Pentapetalae View MSA
122795776 5272 Eudicot View MSA
122047405 5273 Angiosperm View MSA
121349233 5274 Embryophyte View MSA
123381227 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low  
cufflinks 0.195     Low  
cufflinks 0.041     Low  
cufflinks 0.502       High
cufflinks 0.02     Low Low
cufflinks 0.211     Low  

0 Strain