Gene : PGM A. thaliana TAIR10
Primary Identifier:  ? AT5G51820 Defline:  (1 of 1) 5.4.2.5 - Phosphoglucomutase (glucose-cofactor) / Glucose-1-phosphate phosphotransferase
Genomic Order:  4613 Name:  ? AT5G51820
Secondary Identifier:  ? PAC:19668976
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCOSE1PMETAB-PWY Arabidopsis thaliana pathologic  
Athaliana GLYCOGENSYNTH-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3801 Arabidopsis thaliana pathologic  
Athaliana PWY-622 Arabidopsis thaliana pathologic  
Athaliana PWY66-422 Arabidopsis thaliana pathologic  
Athaliana PWY-7238 Arabidopsis thaliana pathologic  
Athaliana PWY-7343 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51820 0.5kb upstream 0.5kb upstream 5190 true Chr5: 21063368-21068557 Arabidopsis thaliana
AT5G51820 0.5kb upstream 0.5kb upstream 500 false Chr5: 21068058-21068557 Arabidopsis thaliana
AT5G51820 0.5kb downstream 0.5kb downstream 5190 true Chr5: 21062868-21068057 Arabidopsis thaliana
AT5G51820 0.5kb downstream 0.5kb downstream 500 false Chr5: 21062868-21063367 Arabidopsis thaliana
AT5G51820 1.0kb upstream 1.0kb upstream 5690 true Chr5: 21063368-21069057 Arabidopsis thaliana
AT5G51820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21068058-21069057 Arabidopsis thaliana
AT5G51820 1.0kb downstream 1.0kb downstream 5690 true Chr5: 21062368-21068057 Arabidopsis thaliana
AT5G51820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21062368-21063367 Arabidopsis thaliana
AT5G51820 2.0kb upstream 2.0kb upstream 6690 true Chr5: 21063368-21070057 Arabidopsis thaliana
AT5G51820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21068058-21070057 Arabidopsis thaliana
AT5G51820 2.0kb downstream 2.0kb downstream 6690 true Chr5: 21061368-21068057 Arabidopsis thaliana
AT5G51820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21061368-21063367 Arabidopsis thaliana
AT5G51820 5.0kb upstream 5.0kb upstream 9690 true Chr5: 21063368-21073057 Arabidopsis thaliana
AT5G51820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21068058-21073057 Arabidopsis thaliana
AT5G51820 5.0kb downstream 5.0kb downstream 9690 true Chr5: 21058368-21068057 Arabidopsis thaliana
AT5G51820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21058368-21063367 Arabidopsis thaliana
AT5G51820 10.0kb upstream 10.0kb upstream 14690 true Chr5: 21063368-21078057 Arabidopsis thaliana
AT5G51820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21068058-21078057 Arabidopsis thaliana
AT5G51820 10.0kb downstream 10.0kb downstream 14690 true Chr5: 21053368-21068057 Arabidopsis thaliana
AT5G51820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21053368-21063367 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371510 5261 Brassicaceae View MSA
123830041 5264 Brassicales-Malvales View MSA
124338370 5266 SBM View MSA
124238871 5268 Malvidae View MSA
124063507 5270 Rosid View MSA
123740568 5271 Pentapetalae View MSA
122791342 5272 Eudicot View MSA
122042690 5273 Angiosperm View MSA
121347507 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.803     High  
cufflinks 4.205        
cufflinks 48.232     High  
cufflinks 4.235        
cufflinks 37.635     High  
cufflinks 3.238       Low

0 Strain