Gene : AT5G51850 A. thaliana TAIR10
Defline:  (1 of 8) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  4617
Name:  ? AT5G51850 Secondary Identifier:  ? PAC:19666730
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51850 0.5kb upstream 0.5kb upstream 2827 true Chr5: 21078752-21081578 Arabidopsis thaliana
AT5G51850 0.5kb upstream 0.5kb upstream 500 false Chr5: 21078752-21079251 Arabidopsis thaliana
AT5G51850 0.5kb downstream 0.5kb downstream 2827 true Chr5: 21079252-21082078 Arabidopsis thaliana
AT5G51850 0.5kb downstream 0.5kb downstream 500 false Chr5: 21081579-21082078 Arabidopsis thaliana
AT5G51850 1.0kb upstream 1.0kb upstream 3327 true Chr5: 21078252-21081578 Arabidopsis thaliana
AT5G51850 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21078252-21079251 Arabidopsis thaliana
AT5G51850 1.0kb downstream 1.0kb downstream 3327 true Chr5: 21079252-21082578 Arabidopsis thaliana
AT5G51850 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21081579-21082578 Arabidopsis thaliana
AT5G51850 2.0kb upstream 2.0kb upstream 4327 true Chr5: 21077252-21081578 Arabidopsis thaliana
AT5G51850 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21077252-21079251 Arabidopsis thaliana
AT5G51850 2.0kb downstream 2.0kb downstream 4327 true Chr5: 21079252-21083578 Arabidopsis thaliana
AT5G51850 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21081579-21083578 Arabidopsis thaliana
AT5G51850 5.0kb upstream 5.0kb upstream 7327 true Chr5: 21074252-21081578 Arabidopsis thaliana
AT5G51850 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21074252-21079251 Arabidopsis thaliana
AT5G51850 5.0kb downstream 5.0kb downstream 7327 true Chr5: 21079252-21086578 Arabidopsis thaliana
AT5G51850 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21081579-21086578 Arabidopsis thaliana
AT5G51850 10.0kb upstream 10.0kb upstream 12327 true Chr5: 21069252-21081578 Arabidopsis thaliana
AT5G51850 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21069252-21079251 Arabidopsis thaliana
AT5G51850 10.0kb downstream 10.0kb downstream 12327 true Chr5: 21079252-21091578 Arabidopsis thaliana
AT5G51850 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21081579-21091578 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377696 5261 Brassicaceae View MSA
123801606 5264 Brassicales-Malvales View MSA
124298886 5266 SBM View MSA
124150427 5268 Malvidae View MSA
124062054 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.822        
cufflinks 1.176        
cufflinks 0.763        
cufflinks 2.214       High
cufflinks 0.651        
cufflinks 0.382       Low

0 Strain