Gene : AT5G51840 A. thaliana TAIR10
Genomic Order:  4615 Name:  ? AT5G51840
Secondary Identifier:  ? PAC:19665621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51840 0.5kb upstream 0.5kb upstream 2995 true Chr5: 21071444-21074438 Arabidopsis thaliana
AT5G51840 0.5kb upstream 0.5kb upstream 500 false Chr5: 21071444-21071943 Arabidopsis thaliana
AT5G51840 0.5kb downstream 0.5kb downstream 2995 true Chr5: 21071944-21074938 Arabidopsis thaliana
AT5G51840 0.5kb downstream 0.5kb downstream 500 false Chr5: 21074439-21074938 Arabidopsis thaliana
AT5G51840 1.0kb upstream 1.0kb upstream 3495 true Chr5: 21070944-21074438 Arabidopsis thaliana
AT5G51840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21070944-21071943 Arabidopsis thaliana
AT5G51840 1.0kb downstream 1.0kb downstream 3495 true Chr5: 21071944-21075438 Arabidopsis thaliana
AT5G51840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21074439-21075438 Arabidopsis thaliana
AT5G51840 2.0kb upstream 2.0kb upstream 4495 true Chr5: 21069944-21074438 Arabidopsis thaliana
AT5G51840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21069944-21071943 Arabidopsis thaliana
AT5G51840 2.0kb downstream 2.0kb downstream 4495 true Chr5: 21071944-21076438 Arabidopsis thaliana
AT5G51840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21074439-21076438 Arabidopsis thaliana
AT5G51840 5.0kb upstream 5.0kb upstream 7495 true Chr5: 21066944-21074438 Arabidopsis thaliana
AT5G51840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21066944-21071943 Arabidopsis thaliana
AT5G51840 5.0kb downstream 5.0kb downstream 7495 true Chr5: 21071944-21079438 Arabidopsis thaliana
AT5G51840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21074439-21079438 Arabidopsis thaliana
AT5G51840 10.0kb upstream 10.0kb upstream 12495 true Chr5: 21061944-21074438 Arabidopsis thaliana
AT5G51840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21061944-21071943 Arabidopsis thaliana
AT5G51840 10.0kb downstream 10.0kb downstream 12495 true Chr5: 21071944-21084438 Arabidopsis thaliana
AT5G51840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21074439-21084438 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366218 5261 Brassicaceae View MSA
123832477 5264 Brassicales-Malvales View MSA
124344946 5266 SBM View MSA
124236865 5268 Malvidae View MSA
124069081 5270 Rosid View MSA
123736919 5271 Pentapetalae View MSA
122788621 5272 Eudicot View MSA
122047565 5273 Angiosperm View MSA
121345240 5274 Embryophyte View MSA
123426204 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.901        
cufflinks 7.008        
cufflinks 5.94        
cufflinks 7.721        
cufflinks 5.23       Low
cufflinks 8.912       High

0 Strain