Gene : AT5G51570 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  4586
Name:  ? AT5G51570 Secondary Identifier:  ? PAC:19665923
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51570 0.5kb upstream 0.5kb upstream 2594 true Chr5: 20948904-20951497 Arabidopsis thaliana
AT5G51570 0.5kb upstream 0.5kb upstream 500 false Chr5: 20948904-20949403 Arabidopsis thaliana
AT5G51570 0.5kb downstream 0.5kb downstream 2594 true Chr5: 20949404-20951997 Arabidopsis thaliana
AT5G51570 0.5kb downstream 0.5kb downstream 500 false Chr5: 20951498-20951997 Arabidopsis thaliana
AT5G51570 1.0kb upstream 1.0kb upstream 3094 true Chr5: 20948404-20951497 Arabidopsis thaliana
AT5G51570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20948404-20949403 Arabidopsis thaliana
AT5G51570 1.0kb downstream 1.0kb downstream 3094 true Chr5: 20949404-20952497 Arabidopsis thaliana
AT5G51570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20951498-20952497 Arabidopsis thaliana
AT5G51570 2.0kb upstream 2.0kb upstream 4094 true Chr5: 20947404-20951497 Arabidopsis thaliana
AT5G51570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20947404-20949403 Arabidopsis thaliana
AT5G51570 2.0kb downstream 2.0kb downstream 4094 true Chr5: 20949404-20953497 Arabidopsis thaliana
AT5G51570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20951498-20953497 Arabidopsis thaliana
AT5G51570 5.0kb upstream 5.0kb upstream 7094 true Chr5: 20944404-20951497 Arabidopsis thaliana
AT5G51570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20944404-20949403 Arabidopsis thaliana
AT5G51570 5.0kb downstream 5.0kb downstream 7094 true Chr5: 20949404-20956497 Arabidopsis thaliana
AT5G51570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20951498-20956497 Arabidopsis thaliana
AT5G51570 10.0kb upstream 10.0kb upstream 12094 true Chr5: 20939404-20951497 Arabidopsis thaliana
AT5G51570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20939404-20949403 Arabidopsis thaliana
AT5G51570 10.0kb downstream 10.0kb downstream 12094 true Chr5: 20949404-20961497 Arabidopsis thaliana
AT5G51570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20951498-20961497 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366958 5261 Brassicaceae View MSA
123835116 5264 Brassicales-Malvales View MSA
124339648 5266 SBM View MSA
124242568 5268 Malvidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.133       High
cufflinks 21.682        
cufflinks 20.561        
cufflinks 21.535        
cufflinks 23.139        
cufflinks 21.211        

0 Strain