Gene : AT5G51380 A. thaliana TAIR10
Defline:  (1 of 4) PTHR24006:SF524 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 Genomic Order:  4565
Name:  ? AT5G51380 Secondary Identifier:  ? PAC:19665687
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51380 0.5kb upstream 0.5kb upstream 2614 true Chr5: 20875376-20877989 Arabidopsis thaliana
AT5G51380 0.5kb upstream 0.5kb upstream 500 false Chr5: 20875376-20875875 Arabidopsis thaliana
AT5G51380 0.5kb downstream 0.5kb downstream 2614 true Chr5: 20875876-20878489 Arabidopsis thaliana
AT5G51380 0.5kb downstream 0.5kb downstream 500 false Chr5: 20877990-20878489 Arabidopsis thaliana
AT5G51380 1.0kb upstream 1.0kb upstream 3114 true Chr5: 20874876-20877989 Arabidopsis thaliana
AT5G51380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20874876-20875875 Arabidopsis thaliana
AT5G51380 1.0kb downstream 1.0kb downstream 3114 true Chr5: 20875876-20878989 Arabidopsis thaliana
AT5G51380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20877990-20878989 Arabidopsis thaliana
AT5G51380 2.0kb upstream 2.0kb upstream 4114 true Chr5: 20873876-20877989 Arabidopsis thaliana
AT5G51380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20873876-20875875 Arabidopsis thaliana
AT5G51380 2.0kb downstream 2.0kb downstream 4114 true Chr5: 20875876-20879989 Arabidopsis thaliana
AT5G51380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20877990-20879989 Arabidopsis thaliana
AT5G51380 5.0kb upstream 5.0kb upstream 7114 true Chr5: 20870876-20877989 Arabidopsis thaliana
AT5G51380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20870876-20875875 Arabidopsis thaliana
AT5G51380 5.0kb downstream 5.0kb downstream 7114 true Chr5: 20875876-20882989 Arabidopsis thaliana
AT5G51380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20877990-20882989 Arabidopsis thaliana
AT5G51380 10.0kb upstream 10.0kb upstream 12114 true Chr5: 20865876-20877989 Arabidopsis thaliana
AT5G51380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20865876-20875875 Arabidopsis thaliana
AT5G51380 10.0kb downstream 10.0kb downstream 12114 true Chr5: 20875876-20887989 Arabidopsis thaliana
AT5G51380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20877990-20887989 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379978 5261 Brassicaceae View MSA
123838741 5264 Brassicales-Malvales View MSA
124344931 5266 SBM View MSA
124252846 5268 Malvidae View MSA
124073716 5270 Rosid View MSA
123747868 5271 Pentapetalae View MSA
122786733 5272 Eudicot View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.071        
cufflinks 3.006        
cufflinks 1.679        
cufflinks 3.289        
cufflinks 1.643       Low
cufflinks 4.594       High

0 Strain