Gene : AT5G51290 A. thaliana TAIR10
Defline:  (1 of 1) K04715 - ceramide kinase (E2.7.1.138, CERK) Genomic Order:  4557
Name:  ? AT5G51290 Secondary Identifier:  ? PAC:19672425
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5129 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51290 0.5kb upstream 0.5kb upstream 4843 true Chr5: 20843998-20848840 Arabidopsis thaliana
AT5G51290 0.5kb upstream 0.5kb upstream 500 false Chr5: 20848341-20848840 Arabidopsis thaliana
AT5G51290 0.5kb downstream 0.5kb downstream 4843 true Chr5: 20843498-20848340 Arabidopsis thaliana
AT5G51290 0.5kb downstream 0.5kb downstream 500 false Chr5: 20843498-20843997 Arabidopsis thaliana
AT5G51290 1.0kb upstream 1.0kb upstream 5343 true Chr5: 20843998-20849340 Arabidopsis thaliana
AT5G51290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20848341-20849340 Arabidopsis thaliana
AT5G51290 1.0kb downstream 1.0kb downstream 5343 true Chr5: 20842998-20848340 Arabidopsis thaliana
AT5G51290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20842998-20843997 Arabidopsis thaliana
AT5G51290 2.0kb upstream 2.0kb upstream 6343 true Chr5: 20843998-20850340 Arabidopsis thaliana
AT5G51290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20848341-20850340 Arabidopsis thaliana
AT5G51290 2.0kb downstream 2.0kb downstream 6343 true Chr5: 20841998-20848340 Arabidopsis thaliana
AT5G51290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20841998-20843997 Arabidopsis thaliana
AT5G51290 5.0kb upstream 5.0kb upstream 9343 true Chr5: 20843998-20853340 Arabidopsis thaliana
AT5G51290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20848341-20853340 Arabidopsis thaliana
AT5G51290 5.0kb downstream 5.0kb downstream 9343 true Chr5: 20838998-20848340 Arabidopsis thaliana
AT5G51290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20838998-20843997 Arabidopsis thaliana
AT5G51290 10.0kb upstream 10.0kb upstream 14343 true Chr5: 20843998-20858340 Arabidopsis thaliana
AT5G51290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20848341-20858340 Arabidopsis thaliana
AT5G51290 10.0kb downstream 10.0kb downstream 14343 true Chr5: 20833998-20848340 Arabidopsis thaliana
AT5G51290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20833998-20843997 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365978 5261 Brassicaceae View MSA
123830936 5264 Brassicales-Malvales View MSA
124346384 5266 SBM View MSA
124251685 5268 Malvidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.943        
cufflinks 8.5        
cufflinks 8.346        
cufflinks 9.008        
cufflinks 10.411       High
cufflinks 6.652       Low

0 Strain