Gene : AT5G51170 A. thaliana TAIR10
Defline:  (1 of 1) KOG3102 - Uncharacterized conserved protein Genomic Order:  4545
Name:  ? AT5G51170 Secondary Identifier:  ? PAC:19668649
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51170 0.5kb upstream 0.5kb upstream 2106 true Chr5: 20793794-20795899 Arabidopsis thaliana
AT5G51170 0.5kb upstream 0.5kb upstream 500 false Chr5: 20795400-20795899 Arabidopsis thaliana
AT5G51170 0.5kb downstream 0.5kb downstream 2106 true Chr5: 20793294-20795399 Arabidopsis thaliana
AT5G51170 0.5kb downstream 0.5kb downstream 500 false Chr5: 20793294-20793793 Arabidopsis thaliana
AT5G51170 1.0kb upstream 1.0kb upstream 2606 true Chr5: 20793794-20796399 Arabidopsis thaliana
AT5G51170 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20795400-20796399 Arabidopsis thaliana
AT5G51170 1.0kb downstream 1.0kb downstream 2606 true Chr5: 20792794-20795399 Arabidopsis thaliana
AT5G51170 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20792794-20793793 Arabidopsis thaliana
AT5G51170 2.0kb upstream 2.0kb upstream 3606 true Chr5: 20793794-20797399 Arabidopsis thaliana
AT5G51170 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20795400-20797399 Arabidopsis thaliana
AT5G51170 2.0kb downstream 2.0kb downstream 3606 true Chr5: 20791794-20795399 Arabidopsis thaliana
AT5G51170 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20791794-20793793 Arabidopsis thaliana
AT5G51170 5.0kb upstream 5.0kb upstream 6606 true Chr5: 20793794-20800399 Arabidopsis thaliana
AT5G51170 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20795400-20800399 Arabidopsis thaliana
AT5G51170 5.0kb downstream 5.0kb downstream 6606 true Chr5: 20788794-20795399 Arabidopsis thaliana
AT5G51170 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20788794-20793793 Arabidopsis thaliana
AT5G51170 10.0kb upstream 10.0kb upstream 11606 true Chr5: 20793794-20805399 Arabidopsis thaliana
AT5G51170 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20795400-20805399 Arabidopsis thaliana
AT5G51170 10.0kb downstream 10.0kb downstream 11606 true Chr5: 20783794-20795399 Arabidopsis thaliana
AT5G51170 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20783794-20793793 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363248 5261 Brassicaceae View MSA
123833722 5264 Brassicales-Malvales View MSA
124345996 5266 SBM View MSA
124243835 5268 Malvidae View MSA
124068859 5270 Rosid View MSA
123738361 5271 Pentapetalae View MSA
122785872 5272 Eudicot View MSA
122050047 5273 Angiosperm View MSA
123429042 5275 Viridiplantae View MSA
121344227 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.847        
cufflinks 2.308        
cufflinks 1.536       Low
cufflinks 2.518       High
cufflinks 2.003        
cufflinks 1.815        

0 Strain