Gene : AT5G51190 A. thaliana TAIR10
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  4547
Name:  ? AT5G51190 Secondary Identifier:  ? PAC:19667234
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51190 0.5kb upstream 0.5kb upstream 1333 true Chr5: 20800584-20801916 Arabidopsis thaliana
AT5G51190 0.5kb upstream 0.5kb upstream 500 false Chr5: 20801417-20801916 Arabidopsis thaliana
AT5G51190 0.5kb downstream 0.5kb downstream 1333 true Chr5: 20800084-20801416 Arabidopsis thaliana
AT5G51190 0.5kb downstream 0.5kb downstream 500 false Chr5: 20800084-20800583 Arabidopsis thaliana
AT5G51190 1.0kb upstream 1.0kb upstream 1833 true Chr5: 20800584-20802416 Arabidopsis thaliana
AT5G51190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20801417-20802416 Arabidopsis thaliana
AT5G51190 1.0kb downstream 1.0kb downstream 1833 true Chr5: 20799584-20801416 Arabidopsis thaliana
AT5G51190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20799584-20800583 Arabidopsis thaliana
AT5G51190 2.0kb upstream 2.0kb upstream 2833 true Chr5: 20800584-20803416 Arabidopsis thaliana
AT5G51190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20801417-20803416 Arabidopsis thaliana
AT5G51190 2.0kb downstream 2.0kb downstream 2833 true Chr5: 20798584-20801416 Arabidopsis thaliana
AT5G51190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20798584-20800583 Arabidopsis thaliana
AT5G51190 5.0kb upstream 5.0kb upstream 5833 true Chr5: 20800584-20806416 Arabidopsis thaliana
AT5G51190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20801417-20806416 Arabidopsis thaliana
AT5G51190 5.0kb downstream 5.0kb downstream 5833 true Chr5: 20795584-20801416 Arabidopsis thaliana
AT5G51190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20795584-20800583 Arabidopsis thaliana
AT5G51190 10.0kb upstream 10.0kb upstream 10833 true Chr5: 20800584-20811416 Arabidopsis thaliana
AT5G51190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20801417-20811416 Arabidopsis thaliana
AT5G51190 10.0kb downstream 10.0kb downstream 10833 true Chr5: 20790584-20801416 Arabidopsis thaliana
AT5G51190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20790584-20800583 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378491 5261 Brassicaceae View MSA
123837459 5264 Brassicales-Malvales View MSA
124350301 5266 SBM View MSA
124248805 5268 Malvidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.327       Low
cufflinks 208.842     High  
cufflinks 29.703     High  
cufflinks 229.568     High  
cufflinks 15.09        
cufflinks 239.143     High  

0 Strain