Gene : MRE11 A. thaliana TAIR10
Primary Identifier:  ? AT5G54260 Defline:  (1 of 1) K10865 - double-strand break repair protein MRE11 (MRE11)
Genomic Order:  4882 Name:  ? AT5G54260
Secondary Identifier:  ? PAC:19668795
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54260 0.5kb upstream 0.5kb upstream 6423 true Chr5: 22031569-22037991 Arabidopsis thaliana
AT5G54260 0.5kb upstream 0.5kb upstream 500 false Chr5: 22031569-22032068 Arabidopsis thaliana
AT5G54260 0.5kb downstream 0.5kb downstream 6423 true Chr5: 22032069-22038491 Arabidopsis thaliana
AT5G54260 0.5kb downstream 0.5kb downstream 500 false Chr5: 22037992-22038491 Arabidopsis thaliana
AT5G54260 1.0kb upstream 1.0kb upstream 6923 true Chr5: 22031069-22037991 Arabidopsis thaliana
AT5G54260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22031069-22032068 Arabidopsis thaliana
AT5G54260 1.0kb downstream 1.0kb downstream 6923 true Chr5: 22032069-22038991 Arabidopsis thaliana
AT5G54260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22037992-22038991 Arabidopsis thaliana
AT5G54260 2.0kb upstream 2.0kb upstream 7923 true Chr5: 22030069-22037991 Arabidopsis thaliana
AT5G54260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22030069-22032068 Arabidopsis thaliana
AT5G54260 2.0kb downstream 2.0kb downstream 7923 true Chr5: 22032069-22039991 Arabidopsis thaliana
AT5G54260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22037992-22039991 Arabidopsis thaliana
AT5G54260 5.0kb upstream 5.0kb upstream 10923 true Chr5: 22027069-22037991 Arabidopsis thaliana
AT5G54260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22027069-22032068 Arabidopsis thaliana
AT5G54260 5.0kb downstream 5.0kb downstream 10923 true Chr5: 22032069-22042991 Arabidopsis thaliana
AT5G54260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22037992-22042991 Arabidopsis thaliana
AT5G54260 10.0kb upstream 10.0kb upstream 15923 true Chr5: 22022069-22037991 Arabidopsis thaliana
AT5G54260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22022069-22032068 Arabidopsis thaliana
AT5G54260 10.0kb downstream 10.0kb downstream 15923 true Chr5: 22032069-22047991 Arabidopsis thaliana
AT5G54260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22037992-22047991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362848 5261 Brassicaceae View MSA
123831136 5264 Brassicales-Malvales View MSA
124338757 5266 SBM View MSA
124240535 5268 Malvidae View MSA
124066590 5270 Rosid View MSA
123740797 5271 Pentapetalae View MSA
122791229 5272 Eudicot View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.07        
cufflinks 2.936       High
cufflinks 0.939        
cufflinks 2.76        
cufflinks 0.876       Low
cufflinks 2.421        

0 Strain