Gene : OMT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G54160 Defline:  (1 of 1) 2.1.1.42//2.1.1.68//2.1.1.76 - Flavone 3'-O-methyltransferase / Quercetin 3'-O-methyltransferase // Caffeate O-methyltransferase // Quercetin 3-O-methyltransferase / Flavonol 3-O-methyltransferase
Genomic Order:  4869 Name:  ? AT5G54160
Secondary Identifier:  ? PAC:19667404
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Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-2181 Arabidopsis thaliana pathologic  
Athaliana PWY-361 Arabidopsis thaliana pathologic  
Athaliana PWY-5168 Arabidopsis thaliana pathologic  
Athaliana PWY-6064 Arabidopsis thaliana pathologic  
Athaliana PWY-6232 Arabidopsis thaliana pathologic  
Athaliana PWY-7186 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54160 0.5kb upstream 0.5kb upstream 2868 true Chr5: 21981496-21984363 Arabidopsis thaliana
AT5G54160 0.5kb upstream 0.5kb upstream 500 false Chr5: 21981496-21981995 Arabidopsis thaliana
AT5G54160 0.5kb downstream 0.5kb downstream 2868 true Chr5: 21981996-21984863 Arabidopsis thaliana
AT5G54160 0.5kb downstream 0.5kb downstream 500 false Chr5: 21984364-21984863 Arabidopsis thaliana
AT5G54160 1.0kb upstream 1.0kb upstream 3368 true Chr5: 21980996-21984363 Arabidopsis thaliana
AT5G54160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21980996-21981995 Arabidopsis thaliana
AT5G54160 1.0kb downstream 1.0kb downstream 3368 true Chr5: 21981996-21985363 Arabidopsis thaliana
AT5G54160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21984364-21985363 Arabidopsis thaliana
AT5G54160 2.0kb upstream 2.0kb upstream 4368 true Chr5: 21979996-21984363 Arabidopsis thaliana
AT5G54160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21979996-21981995 Arabidopsis thaliana
AT5G54160 2.0kb downstream 2.0kb downstream 4368 true Chr5: 21981996-21986363 Arabidopsis thaliana
AT5G54160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21984364-21986363 Arabidopsis thaliana
AT5G54160 5.0kb upstream 5.0kb upstream 7368 true Chr5: 21976996-21984363 Arabidopsis thaliana
AT5G54160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21976996-21981995 Arabidopsis thaliana
AT5G54160 5.0kb downstream 5.0kb downstream 7368 true Chr5: 21981996-21989363 Arabidopsis thaliana
AT5G54160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21984364-21989363 Arabidopsis thaliana
AT5G54160 10.0kb upstream 10.0kb upstream 12368 true Chr5: 21971996-21984363 Arabidopsis thaliana
AT5G54160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21971996-21981995 Arabidopsis thaliana
AT5G54160 10.0kb downstream 10.0kb downstream 12368 true Chr5: 21981996-21994363 Arabidopsis thaliana
AT5G54160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21984364-21994363 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365098 5261 Brassicaceae View MSA
123834227 5264 Brassicales-Malvales View MSA
124338145 5266 SBM View MSA
124247270 5268 Malvidae View MSA
124065295 5270 Rosid View MSA
123739758 5271 Pentapetalae View MSA
122791331 5272 Eudicot View MSA
122042178 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.733     High  
cufflinks 75.164     High  
cufflinks 22.415       Low
cufflinks 102.649     High High
cufflinks 31.253     High  
cufflinks 106.07     High High

0 Strain