Gene : ILL3 A. thaliana TAIR10
Primary Identifier:  ? AT5G54140 Defline:  (1 of 1) PTHR11014//PTHR11014:SF103 - PEPTIDASE M20 FAMILY MEMBER // SUBFAMILY NOT NAMED
Genomic Order:  4865 Name:  ? AT5G54140
Secondary Identifier:  ? PAC:19666501
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G54140 0.5kb upstream 0.5kb upstream 2729 true Chr5: 21965333-21968061 Arabidopsis thaliana
AT5G54140 0.5kb upstream 0.5kb upstream 500 false Chr5: 21965333-21965832 Arabidopsis thaliana
AT5G54140 0.5kb downstream 0.5kb downstream 2729 true Chr5: 21965833-21968561 Arabidopsis thaliana
AT5G54140 0.5kb downstream 0.5kb downstream 500 false Chr5: 21968062-21968561 Arabidopsis thaliana
AT5G54140 1.0kb upstream 1.0kb upstream 3229 true Chr5: 21964833-21968061 Arabidopsis thaliana
AT5G54140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21964833-21965832 Arabidopsis thaliana
AT5G54140 1.0kb downstream 1.0kb downstream 3229 true Chr5: 21965833-21969061 Arabidopsis thaliana
AT5G54140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21968062-21969061 Arabidopsis thaliana
AT5G54140 2.0kb upstream 2.0kb upstream 4229 true Chr5: 21963833-21968061 Arabidopsis thaliana
AT5G54140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21963833-21965832 Arabidopsis thaliana
AT5G54140 2.0kb downstream 2.0kb downstream 4229 true Chr5: 21965833-21970061 Arabidopsis thaliana
AT5G54140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21968062-21970061 Arabidopsis thaliana
AT5G54140 5.0kb upstream 5.0kb upstream 7229 true Chr5: 21960833-21968061 Arabidopsis thaliana
AT5G54140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21960833-21965832 Arabidopsis thaliana
AT5G54140 5.0kb downstream 5.0kb downstream 7229 true Chr5: 21965833-21973061 Arabidopsis thaliana
AT5G54140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21968062-21973061 Arabidopsis thaliana
AT5G54140 10.0kb upstream 10.0kb upstream 12229 true Chr5: 21955833-21968061 Arabidopsis thaliana
AT5G54140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21955833-21965832 Arabidopsis thaliana
AT5G54140 10.0kb downstream 10.0kb downstream 12229 true Chr5: 21965833-21978061 Arabidopsis thaliana
AT5G54140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21968062-21978061 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371168 5261 Brassicaceae View MSA
123838990 5264 Brassicales-Malvales View MSA
124338042 5266 SBM View MSA
124245167 5268 Malvidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.906        
cufflinks 2.793        
cufflinks 1.25       Low
cufflinks 3.448        
cufflinks 2.03        
cufflinks 2.846        

0 Strain