Gene : AT5G53750 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4822
Name:  ? AT5G53750 Secondary Identifier:  ? PAC:19670912
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53750 0.5kb upstream 0.5kb upstream 1978 true Chr5: 21816866-21818843 Arabidopsis thaliana
AT5G53750 0.5kb upstream 0.5kb upstream 500 false Chr5: 21816866-21817365 Arabidopsis thaliana
AT5G53750 0.5kb downstream 0.5kb downstream 1978 true Chr5: 21817366-21819343 Arabidopsis thaliana
AT5G53750 0.5kb downstream 0.5kb downstream 500 false Chr5: 21818844-21819343 Arabidopsis thaliana
AT5G53750 1.0kb upstream 1.0kb upstream 2478 true Chr5: 21816366-21818843 Arabidopsis thaliana
AT5G53750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21816366-21817365 Arabidopsis thaliana
AT5G53750 1.0kb downstream 1.0kb downstream 2478 true Chr5: 21817366-21819843 Arabidopsis thaliana
AT5G53750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21818844-21819843 Arabidopsis thaliana
AT5G53750 2.0kb upstream 2.0kb upstream 3478 true Chr5: 21815366-21818843 Arabidopsis thaliana
AT5G53750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21815366-21817365 Arabidopsis thaliana
AT5G53750 2.0kb downstream 2.0kb downstream 3478 true Chr5: 21817366-21820843 Arabidopsis thaliana
AT5G53750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21818844-21820843 Arabidopsis thaliana
AT5G53750 5.0kb upstream 5.0kb upstream 6478 true Chr5: 21812366-21818843 Arabidopsis thaliana
AT5G53750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21812366-21817365 Arabidopsis thaliana
AT5G53750 5.0kb downstream 5.0kb downstream 6478 true Chr5: 21817366-21823843 Arabidopsis thaliana
AT5G53750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21818844-21823843 Arabidopsis thaliana
AT5G53750 10.0kb upstream 10.0kb upstream 11478 true Chr5: 21807366-21818843 Arabidopsis thaliana
AT5G53750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21807366-21817365 Arabidopsis thaliana
AT5G53750 10.0kb downstream 10.0kb downstream 11478 true Chr5: 21817366-21828843 Arabidopsis thaliana
AT5G53750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21818844-21828843 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375416 5261 Brassicaceae View MSA
123837926 5264 Brassicales-Malvales View MSA
124340536 5266 SBM View MSA
124245935 5268 Malvidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.419       Low
cufflinks 12.287        
cufflinks 16.635        
cufflinks 11.577        
cufflinks 4.329       Low
cufflinks 14.895        

0 Strain