Gene : AT5G53610 A. thaliana TAIR10
Defline:  (1 of 13) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  4807
Name:  ? AT5G53610 Secondary Identifier:  ? PAC:19667201
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53610 0.5kb upstream 0.5kb upstream 833 true Chr5: 21778561-21779393 Arabidopsis thaliana
AT5G53610 0.5kb upstream 0.5kb upstream 500 false Chr5: 21778561-21779060 Arabidopsis thaliana
AT5G53610 0.5kb downstream 0.5kb downstream 833 true Chr5: 21779061-21779893 Arabidopsis thaliana
AT5G53610 0.5kb downstream 0.5kb downstream 500 false Chr5: 21779394-21779893 Arabidopsis thaliana
AT5G53610 1.0kb upstream 1.0kb upstream 1333 true Chr5: 21778061-21779393 Arabidopsis thaliana
AT5G53610 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21778061-21779060 Arabidopsis thaliana
AT5G53610 1.0kb downstream 1.0kb downstream 1333 true Chr5: 21779061-21780393 Arabidopsis thaliana
AT5G53610 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21779394-21780393 Arabidopsis thaliana
AT5G53610 2.0kb upstream 2.0kb upstream 2333 true Chr5: 21777061-21779393 Arabidopsis thaliana
AT5G53610 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21777061-21779060 Arabidopsis thaliana
AT5G53610 2.0kb downstream 2.0kb downstream 2333 true Chr5: 21779061-21781393 Arabidopsis thaliana
AT5G53610 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21779394-21781393 Arabidopsis thaliana
AT5G53610 5.0kb upstream 5.0kb upstream 5333 true Chr5: 21774061-21779393 Arabidopsis thaliana
AT5G53610 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21774061-21779060 Arabidopsis thaliana
AT5G53610 5.0kb downstream 5.0kb downstream 5333 true Chr5: 21779061-21784393 Arabidopsis thaliana
AT5G53610 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21779394-21784393 Arabidopsis thaliana
AT5G53610 10.0kb upstream 10.0kb upstream 10333 true Chr5: 21769061-21779393 Arabidopsis thaliana
AT5G53610 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21769061-21779060 Arabidopsis thaliana
AT5G53610 10.0kb downstream 10.0kb downstream 10333 true Chr5: 21779061-21789393 Arabidopsis thaliana
AT5G53610 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21779394-21789393 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376167 5261 Brassicaceae View MSA
123801161 5264 Brassicales-Malvales View MSA
124349799 5266 SBM View MSA
124254045 5268 Malvidae View MSA
124038019 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain