Gene : CB5-E A. thaliana TAIR10
Primary Identifier:  ? AT5G53560 Defline:  (1 of 1) PTHR19359:SF22 - CYTOCHROME B5 ISOFORM A
Genomic Order:  4800 Name:  ? AT5G53560
Secondary Identifier:  ? PAC:19672094
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53560 0.5kb upstream 0.5kb upstream 1712 true Chr5: 21758867-21760578 Arabidopsis thaliana
AT5G53560 0.5kb upstream 0.5kb upstream 500 false Chr5: 21758867-21759366 Arabidopsis thaliana
AT5G53560 0.5kb downstream 0.5kb downstream 1712 true Chr5: 21759367-21761078 Arabidopsis thaliana
AT5G53560 0.5kb downstream 0.5kb downstream 500 false Chr5: 21760579-21761078 Arabidopsis thaliana
AT5G53560 1.0kb upstream 1.0kb upstream 2212 true Chr5: 21758367-21760578 Arabidopsis thaliana
AT5G53560 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21758367-21759366 Arabidopsis thaliana
AT5G53560 1.0kb downstream 1.0kb downstream 2212 true Chr5: 21759367-21761578 Arabidopsis thaliana
AT5G53560 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21760579-21761578 Arabidopsis thaliana
AT5G53560 2.0kb upstream 2.0kb upstream 3212 true Chr5: 21757367-21760578 Arabidopsis thaliana
AT5G53560 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21757367-21759366 Arabidopsis thaliana
AT5G53560 2.0kb downstream 2.0kb downstream 3212 true Chr5: 21759367-21762578 Arabidopsis thaliana
AT5G53560 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21760579-21762578 Arabidopsis thaliana
AT5G53560 5.0kb upstream 5.0kb upstream 6212 true Chr5: 21754367-21760578 Arabidopsis thaliana
AT5G53560 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21754367-21759366 Arabidopsis thaliana
AT5G53560 5.0kb downstream 5.0kb downstream 6212 true Chr5: 21759367-21765578 Arabidopsis thaliana
AT5G53560 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21760579-21765578 Arabidopsis thaliana
AT5G53560 10.0kb upstream 10.0kb upstream 11212 true Chr5: 21749367-21760578 Arabidopsis thaliana
AT5G53560 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21749367-21759366 Arabidopsis thaliana
AT5G53560 10.0kb downstream 10.0kb downstream 11212 true Chr5: 21759367-21770578 Arabidopsis thaliana
AT5G53560 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21760579-21770578 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362634 5261 Brassicaceae View MSA
123833695 5264 Brassicales-Malvales View MSA
124341368 5266 SBM View MSA
124254514 5268 Malvidae View MSA
124065373 5270 Rosid View MSA
123748513 5271 Pentapetalae View MSA
122795190 5272 Eudicot View MSA
122049479 5273 Angiosperm View MSA
121350461 5274 Embryophyte View MSA
123428511 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.746     High  
cufflinks 157.76     High  
cufflinks 95.478     High  
cufflinks 180.436     High High
cufflinks 102.271     High  
cufflinks 180.996     High High

0 Strain