Gene : AT5G53150 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24078//PTHR24078:SF274 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  4756
Name:  ? AT5G53150 Secondary Identifier:  ? PAC:19672881
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53150 0.5kb upstream 0.5kb upstream 3201 true Chr5: 21554291-21557491 Arabidopsis thaliana
AT5G53150 0.5kb upstream 0.5kb upstream 500 false Chr5: 21554291-21554790 Arabidopsis thaliana
AT5G53150 0.5kb downstream 0.5kb downstream 3201 true Chr5: 21554791-21557991 Arabidopsis thaliana
AT5G53150 0.5kb downstream 0.5kb downstream 500 false Chr5: 21557492-21557991 Arabidopsis thaliana
AT5G53150 1.0kb upstream 1.0kb upstream 3701 true Chr5: 21553791-21557491 Arabidopsis thaliana
AT5G53150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21553791-21554790 Arabidopsis thaliana
AT5G53150 1.0kb downstream 1.0kb downstream 3701 true Chr5: 21554791-21558491 Arabidopsis thaliana
AT5G53150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21557492-21558491 Arabidopsis thaliana
AT5G53150 2.0kb upstream 2.0kb upstream 4701 true Chr5: 21552791-21557491 Arabidopsis thaliana
AT5G53150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21552791-21554790 Arabidopsis thaliana
AT5G53150 2.0kb downstream 2.0kb downstream 4701 true Chr5: 21554791-21559491 Arabidopsis thaliana
AT5G53150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21557492-21559491 Arabidopsis thaliana
AT5G53150 5.0kb upstream 5.0kb upstream 7701 true Chr5: 21549791-21557491 Arabidopsis thaliana
AT5G53150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21549791-21554790 Arabidopsis thaliana
AT5G53150 5.0kb downstream 5.0kb downstream 7701 true Chr5: 21554791-21562491 Arabidopsis thaliana
AT5G53150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21557492-21562491 Arabidopsis thaliana
AT5G53150 10.0kb upstream 10.0kb upstream 12701 true Chr5: 21544791-21557491 Arabidopsis thaliana
AT5G53150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21544791-21554790 Arabidopsis thaliana
AT5G53150 10.0kb downstream 10.0kb downstream 12701 true Chr5: 21554791-21567491 Arabidopsis thaliana
AT5G53150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21557492-21567491 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370919 5261 Brassicaceae View MSA
123836551 5264 Brassicales-Malvales View MSA
124340856 5266 SBM View MSA
124240383 5268 Malvidae View MSA
124073308 5270 Rosid View MSA
123746271 5271 Pentapetalae View MSA
122796455 5272 Eudicot View MSA
122048090 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348216 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.373        
cufflinks 12.168        
cufflinks 11.708        
cufflinks 13.704        
cufflinks 7.522       Low
cufflinks 11.385        

0 Strain