Gene : AT5G53070 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21368//PTHR21368:SF21 - 50S RIBOSOMAL PROTEIN L9 // SUBFAMILY NOT NAMED Genomic Order:  4747
Name:  ? AT5G53070 Secondary Identifier:  ? PAC:19666640
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53070 0.5kb upstream 0.5kb upstream 2329 true Chr5: 21518093-21520421 Arabidopsis thaliana
AT5G53070 0.5kb upstream 0.5kb upstream 500 false Chr5: 21518093-21518592 Arabidopsis thaliana
AT5G53070 0.5kb downstream 0.5kb downstream 2329 true Chr5: 21518593-21520921 Arabidopsis thaliana
AT5G53070 0.5kb downstream 0.5kb downstream 500 false Chr5: 21520422-21520921 Arabidopsis thaliana
AT5G53070 1.0kb upstream 1.0kb upstream 2829 true Chr5: 21517593-21520421 Arabidopsis thaliana
AT5G53070 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21517593-21518592 Arabidopsis thaliana
AT5G53070 1.0kb downstream 1.0kb downstream 2829 true Chr5: 21518593-21521421 Arabidopsis thaliana
AT5G53070 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21520422-21521421 Arabidopsis thaliana
AT5G53070 2.0kb upstream 2.0kb upstream 3829 true Chr5: 21516593-21520421 Arabidopsis thaliana
AT5G53070 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21516593-21518592 Arabidopsis thaliana
AT5G53070 2.0kb downstream 2.0kb downstream 3829 true Chr5: 21518593-21522421 Arabidopsis thaliana
AT5G53070 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21520422-21522421 Arabidopsis thaliana
AT5G53070 5.0kb upstream 5.0kb upstream 6829 true Chr5: 21513593-21520421 Arabidopsis thaliana
AT5G53070 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21513593-21518592 Arabidopsis thaliana
AT5G53070 5.0kb downstream 5.0kb downstream 6829 true Chr5: 21518593-21525421 Arabidopsis thaliana
AT5G53070 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21520422-21525421 Arabidopsis thaliana
AT5G53070 10.0kb upstream 10.0kb upstream 11829 true Chr5: 21508593-21520421 Arabidopsis thaliana
AT5G53070 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21508593-21518592 Arabidopsis thaliana
AT5G53070 10.0kb downstream 10.0kb downstream 11829 true Chr5: 21518593-21530421 Arabidopsis thaliana
AT5G53070 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21520422-21530421 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369138 5261 Brassicaceae View MSA
123829295 5264 Brassicales-Malvales View MSA
124340196 5266 SBM View MSA
124250967 5268 Malvidae View MSA
124067972 5270 Rosid View MSA
123738557 5271 Pentapetalae View MSA
122793564 5272 Eudicot View MSA
122046340 5273 Angiosperm View MSA
121346929 5274 Embryophyte View MSA
123425194 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.102        
cufflinks 10.521        
cufflinks 6.867        
cufflinks 11.87        
cufflinks 5.665       Low
cufflinks 13.043       High

0 Strain