Gene : AT5G53090 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24320:SF73 - OXIDOREDUCTASE FEY3-RELATED Genomic Order:  4749
Name:  ? AT5G53090 Secondary Identifier:  ? PAC:19668696
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53090 0.5kb upstream 0.5kb upstream 2819 true Chr5: 21522879-21525697 Arabidopsis thaliana
AT5G53090 0.5kb upstream 0.5kb upstream 500 false Chr5: 21522879-21523378 Arabidopsis thaliana
AT5G53090 0.5kb downstream 0.5kb downstream 2819 true Chr5: 21523379-21526197 Arabidopsis thaliana
AT5G53090 0.5kb downstream 0.5kb downstream 500 false Chr5: 21525698-21526197 Arabidopsis thaliana
AT5G53090 1.0kb upstream 1.0kb upstream 3319 true Chr5: 21522379-21525697 Arabidopsis thaliana
AT5G53090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21522379-21523378 Arabidopsis thaliana
AT5G53090 1.0kb downstream 1.0kb downstream 3319 true Chr5: 21523379-21526697 Arabidopsis thaliana
AT5G53090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21525698-21526697 Arabidopsis thaliana
AT5G53090 2.0kb upstream 2.0kb upstream 4319 true Chr5: 21521379-21525697 Arabidopsis thaliana
AT5G53090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21521379-21523378 Arabidopsis thaliana
AT5G53090 2.0kb downstream 2.0kb downstream 4319 true Chr5: 21523379-21527697 Arabidopsis thaliana
AT5G53090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21525698-21527697 Arabidopsis thaliana
AT5G53090 5.0kb upstream 5.0kb upstream 7319 true Chr5: 21518379-21525697 Arabidopsis thaliana
AT5G53090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21518379-21523378 Arabidopsis thaliana
AT5G53090 5.0kb downstream 5.0kb downstream 7319 true Chr5: 21523379-21530697 Arabidopsis thaliana
AT5G53090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21525698-21530697 Arabidopsis thaliana
AT5G53090 10.0kb upstream 10.0kb upstream 12319 true Chr5: 21513379-21525697 Arabidopsis thaliana
AT5G53090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21513379-21523378 Arabidopsis thaliana
AT5G53090 10.0kb downstream 10.0kb downstream 12319 true Chr5: 21523379-21535697 Arabidopsis thaliana
AT5G53090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21525698-21535697 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367713 5261 Brassicaceae View MSA
123835341 5264 Brassicales-Malvales View MSA
124339193 5266 SBM View MSA
124241700 5268 Malvidae View MSA
124064001 5270 Rosid View MSA
123738896 5271 Pentapetalae View MSA
122789956 5272 Eudicot View MSA
122041972 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121343975 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.932        
cufflinks 7.772        
cufflinks 1.904        
cufflinks 8.042        
cufflinks 1.558       Low
cufflinks 8.875        

0 Strain