Gene : AT5G52950 A. thaliana TAIR10
Genomic Order:  4732 Name:  ? AT5G52950
Secondary Identifier:  ? PAC:19672020
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52950 0.5kb upstream 0.5kb upstream 3553 true Chr5: 21473887-21477439 Arabidopsis thaliana
AT5G52950 0.5kb upstream 0.5kb upstream 500 false Chr5: 21476940-21477439 Arabidopsis thaliana
AT5G52950 0.5kb downstream 0.5kb downstream 3553 true Chr5: 21473387-21476939 Arabidopsis thaliana
AT5G52950 0.5kb downstream 0.5kb downstream 500 false Chr5: 21473387-21473886 Arabidopsis thaliana
AT5G52950 1.0kb upstream 1.0kb upstream 4053 true Chr5: 21473887-21477939 Arabidopsis thaliana
AT5G52950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21476940-21477939 Arabidopsis thaliana
AT5G52950 1.0kb downstream 1.0kb downstream 4053 true Chr5: 21472887-21476939 Arabidopsis thaliana
AT5G52950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21472887-21473886 Arabidopsis thaliana
AT5G52950 2.0kb upstream 2.0kb upstream 5053 true Chr5: 21473887-21478939 Arabidopsis thaliana
AT5G52950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21476940-21478939 Arabidopsis thaliana
AT5G52950 2.0kb downstream 2.0kb downstream 5053 true Chr5: 21471887-21476939 Arabidopsis thaliana
AT5G52950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21471887-21473886 Arabidopsis thaliana
AT5G52950 5.0kb upstream 5.0kb upstream 8053 true Chr5: 21473887-21481939 Arabidopsis thaliana
AT5G52950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21476940-21481939 Arabidopsis thaliana
AT5G52950 5.0kb downstream 5.0kb downstream 8053 true Chr5: 21468887-21476939 Arabidopsis thaliana
AT5G52950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21468887-21473886 Arabidopsis thaliana
AT5G52950 10.0kb upstream 10.0kb upstream 13053 true Chr5: 21473887-21486939 Arabidopsis thaliana
AT5G52950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21476940-21486939 Arabidopsis thaliana
AT5G52950 10.0kb downstream 10.0kb downstream 13053 true Chr5: 21463887-21476939 Arabidopsis thaliana
AT5G52950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21463887-21473886 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367212 5261 Brassicaceae View MSA
123832339 5264 Brassicales-Malvales View MSA
124321795 5266 SBM View MSA
124242482 5268 Malvidae View MSA
124069218 5270 Rosid View MSA
123740023 5271 Pentapetalae View MSA
122796084 5272 Eudicot View MSA
122042830 5273 Angiosperm View MSA
121310031 5274 Embryophyte View MSA
123347634 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.691        
cufflinks 3.075        
cufflinks 1.448        
cufflinks 2.875        
cufflinks 1.132       Low
cufflinks 3.339       High

0 Strain