Gene : PSL4 A. thaliana TAIR10
Primary Identifier:  ? AT5G56360 Defline:  (1 of 1) K08288 - protein kinase C substrate 80K-H (PRKCSH)
Genomic Order:  5107 Name:  ? AT5G56360
Secondary Identifier:  ? PAC:19670989
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56360 0.5kb upstream 0.5kb upstream 5224 true Chr5: 22823302-22828525 Arabidopsis thaliana
AT5G56360 0.5kb upstream 0.5kb upstream 500 false Chr5: 22828026-22828525 Arabidopsis thaliana
AT5G56360 0.5kb downstream 0.5kb downstream 5224 true Chr5: 22822802-22828025 Arabidopsis thaliana
AT5G56360 0.5kb downstream 0.5kb downstream 500 false Chr5: 22822802-22823301 Arabidopsis thaliana
AT5G56360 1.0kb upstream 1.0kb upstream 5724 true Chr5: 22823302-22829025 Arabidopsis thaliana
AT5G56360 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22828026-22829025 Arabidopsis thaliana
AT5G56360 1.0kb downstream 1.0kb downstream 5724 true Chr5: 22822302-22828025 Arabidopsis thaliana
AT5G56360 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22822302-22823301 Arabidopsis thaliana
AT5G56360 2.0kb upstream 2.0kb upstream 6724 true Chr5: 22823302-22830025 Arabidopsis thaliana
AT5G56360 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22828026-22830025 Arabidopsis thaliana
AT5G56360 2.0kb downstream 2.0kb downstream 6724 true Chr5: 22821302-22828025 Arabidopsis thaliana
AT5G56360 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22821302-22823301 Arabidopsis thaliana
AT5G56360 5.0kb upstream 5.0kb upstream 9724 true Chr5: 22823302-22833025 Arabidopsis thaliana
AT5G56360 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22828026-22833025 Arabidopsis thaliana
AT5G56360 5.0kb downstream 5.0kb downstream 9724 true Chr5: 22818302-22828025 Arabidopsis thaliana
AT5G56360 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22818302-22823301 Arabidopsis thaliana
AT5G56360 10.0kb upstream 10.0kb upstream 14724 true Chr5: 22823302-22838025 Arabidopsis thaliana
AT5G56360 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22828026-22838025 Arabidopsis thaliana
AT5G56360 10.0kb downstream 10.0kb downstream 14724 true Chr5: 22813302-22828025 Arabidopsis thaliana
AT5G56360 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22813302-22823301 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026165 5273 Angiosperm View MSA
122375232 5261 Brassicaceae View MSA
123839673 5264 Brassicales-Malvales View MSA
124346217 5266 SBM View MSA
124242137 5268 Malvidae View MSA
124060564 5270 Rosid View MSA
123753709 5271 Pentapetalae View MSA
122790613 5272 Eudicot View MSA
121346630 5274 Embryophyte View MSA
123428859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.586        
cufflinks 22.791        
cufflinks 11.798       Low
cufflinks 24.436        
cufflinks 11.05       Low
cufflinks 25.38        

0 Strain