Gene : AT5G56160 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23324:SF84 - PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH13-RELATED Genomic Order:  5086
Name:  ? AT5G56160 Secondary Identifier:  ? PAC:19667565
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56160 0.5kb upstream 0.5kb upstream 4117 true Chr5: 22731474-22735590 Arabidopsis thaliana
AT5G56160 0.5kb upstream 0.5kb upstream 500 false Chr5: 22731474-22731973 Arabidopsis thaliana
AT5G56160 0.5kb downstream 0.5kb downstream 4117 true Chr5: 22731974-22736090 Arabidopsis thaliana
AT5G56160 0.5kb downstream 0.5kb downstream 500 false Chr5: 22735591-22736090 Arabidopsis thaliana
AT5G56160 1.0kb upstream 1.0kb upstream 4617 true Chr5: 22730974-22735590 Arabidopsis thaliana
AT5G56160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22730974-22731973 Arabidopsis thaliana
AT5G56160 1.0kb downstream 1.0kb downstream 4617 true Chr5: 22731974-22736590 Arabidopsis thaliana
AT5G56160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22735591-22736590 Arabidopsis thaliana
AT5G56160 2.0kb upstream 2.0kb upstream 5617 true Chr5: 22729974-22735590 Arabidopsis thaliana
AT5G56160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22729974-22731973 Arabidopsis thaliana
AT5G56160 2.0kb downstream 2.0kb downstream 5617 true Chr5: 22731974-22737590 Arabidopsis thaliana
AT5G56160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22735591-22737590 Arabidopsis thaliana
AT5G56160 5.0kb upstream 5.0kb upstream 8617 true Chr5: 22726974-22735590 Arabidopsis thaliana
AT5G56160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22726974-22731973 Arabidopsis thaliana
AT5G56160 5.0kb downstream 5.0kb downstream 8617 true Chr5: 22731974-22740590 Arabidopsis thaliana
AT5G56160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22735591-22740590 Arabidopsis thaliana
AT5G56160 10.0kb upstream 10.0kb upstream 13617 true Chr5: 22721974-22735590 Arabidopsis thaliana
AT5G56160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22721974-22731973 Arabidopsis thaliana
AT5G56160 10.0kb downstream 10.0kb downstream 13617 true Chr5: 22731974-22745590 Arabidopsis thaliana
AT5G56160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22735591-22745590 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041205 5273 Angiosperm View MSA
122367110 5261 Brassicaceae View MSA
123839798 5264 Brassicales-Malvales View MSA
124337085 5266 SBM View MSA
124240015 5268 Malvidae View MSA
124061645 5270 Rosid View MSA
123749108 5271 Pentapetalae View MSA
122791720 5272 Eudicot View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.887        
cufflinks 11.067       High
cufflinks 1.259       Low
cufflinks 7.372        
cufflinks 1.687        
cufflinks 9.395        

0 Strain