Gene : AT5G56140 A. thaliana TAIR10
Defline:  (1 of 5) K14945 - protein quaking (QKI) Genomic Order:  5084
Name:  ? AT5G56140 Secondary Identifier:  ? PAC:19671263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56140 0.5kb upstream 0.5kb upstream 3475 true Chr5: 22724869-22728343 Arabidopsis thaliana
AT5G56140 0.5kb upstream 0.5kb upstream 500 false Chr5: 22724869-22725368 Arabidopsis thaliana
AT5G56140 0.5kb downstream 0.5kb downstream 3475 true Chr5: 22725369-22728843 Arabidopsis thaliana
AT5G56140 0.5kb downstream 0.5kb downstream 500 false Chr5: 22728344-22728843 Arabidopsis thaliana
AT5G56140 1.0kb upstream 1.0kb upstream 3975 true Chr5: 22724369-22728343 Arabidopsis thaliana
AT5G56140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22724369-22725368 Arabidopsis thaliana
AT5G56140 1.0kb downstream 1.0kb downstream 3975 true Chr5: 22725369-22729343 Arabidopsis thaliana
AT5G56140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22728344-22729343 Arabidopsis thaliana
AT5G56140 2.0kb upstream 2.0kb upstream 4975 true Chr5: 22723369-22728343 Arabidopsis thaliana
AT5G56140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22723369-22725368 Arabidopsis thaliana
AT5G56140 2.0kb downstream 2.0kb downstream 4975 true Chr5: 22725369-22730343 Arabidopsis thaliana
AT5G56140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22728344-22730343 Arabidopsis thaliana
AT5G56140 5.0kb upstream 5.0kb upstream 7975 true Chr5: 22720369-22728343 Arabidopsis thaliana
AT5G56140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22720369-22725368 Arabidopsis thaliana
AT5G56140 5.0kb downstream 5.0kb downstream 7975 true Chr5: 22725369-22733343 Arabidopsis thaliana
AT5G56140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22728344-22733343 Arabidopsis thaliana
AT5G56140 10.0kb upstream 10.0kb upstream 12975 true Chr5: 22715369-22728343 Arabidopsis thaliana
AT5G56140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22715369-22725368 Arabidopsis thaliana
AT5G56140 10.0kb downstream 10.0kb downstream 12975 true Chr5: 22725369-22738343 Arabidopsis thaliana
AT5G56140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22728344-22738343 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380165 5261 Brassicaceae View MSA
123840090 5264 Brassicales-Malvales View MSA
124346737 5266 SBM View MSA
124251683 5268 Malvidae View MSA
124061318 5270 Rosid View MSA
123738664 5271 Pentapetalae View MSA
122792934 5272 Eudicot View MSA
122044537 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.664        
cufflinks 48.099     High High
cufflinks 26.485     High Low
cufflinks 39.358     High  
cufflinks 29.251     High  
cufflinks 39.95     High  

0 Strain