Gene : ARP8 A. thaliana TAIR10
Primary Identifier:  ? AT5G56180 Defline:  (1 of 1) K16616 - actin-related protein 8, plant (PARP8)
Genomic Order:  5088 Name:  ? AT5G56180
Secondary Identifier:  ? PAC:19666865
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56180 0.5kb upstream 0.5kb upstream 4207 true Chr5: 22737325-22741531 Arabidopsis thaliana
AT5G56180 0.5kb upstream 0.5kb upstream 500 false Chr5: 22741032-22741531 Arabidopsis thaliana
AT5G56180 0.5kb downstream 0.5kb downstream 4207 true Chr5: 22736825-22741031 Arabidopsis thaliana
AT5G56180 0.5kb downstream 0.5kb downstream 500 false Chr5: 22736825-22737324 Arabidopsis thaliana
AT5G56180 1.0kb upstream 1.0kb upstream 4707 true Chr5: 22737325-22742031 Arabidopsis thaliana
AT5G56180 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22741032-22742031 Arabidopsis thaliana
AT5G56180 1.0kb downstream 1.0kb downstream 4707 true Chr5: 22736325-22741031 Arabidopsis thaliana
AT5G56180 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22736325-22737324 Arabidopsis thaliana
AT5G56180 2.0kb upstream 2.0kb upstream 5707 true Chr5: 22737325-22743031 Arabidopsis thaliana
AT5G56180 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22741032-22743031 Arabidopsis thaliana
AT5G56180 2.0kb downstream 2.0kb downstream 5707 true Chr5: 22735325-22741031 Arabidopsis thaliana
AT5G56180 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22735325-22737324 Arabidopsis thaliana
AT5G56180 5.0kb upstream 5.0kb upstream 8707 true Chr5: 22737325-22746031 Arabidopsis thaliana
AT5G56180 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22741032-22746031 Arabidopsis thaliana
AT5G56180 5.0kb downstream 5.0kb downstream 8707 true Chr5: 22732325-22741031 Arabidopsis thaliana
AT5G56180 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22732325-22737324 Arabidopsis thaliana
AT5G56180 10.0kb upstream 10.0kb upstream 13707 true Chr5: 22737325-22751031 Arabidopsis thaliana
AT5G56180 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22741032-22751031 Arabidopsis thaliana
AT5G56180 10.0kb downstream 10.0kb downstream 13707 true Chr5: 22727325-22741031 Arabidopsis thaliana
AT5G56180 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22727325-22737324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364770 5261 Brassicaceae View MSA
123829916 5264 Brassicales-Malvales View MSA
124340610 5266 SBM View MSA
124238839 5268 Malvidae View MSA
124063232 5270 Rosid View MSA
123744572 5271 Pentapetalae View MSA
122792613 5272 Eudicot View MSA
122045785 5273 Angiosperm View MSA
121310502 5274 Embryophyte View MSA
123347970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.041        
cufflinks 2.411        
cufflinks 4.028        
cufflinks 2.855        
cufflinks 5.506       High
cufflinks 1.783       Low

0 Strain