Gene : WIP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G56210 Defline:  (1 of 3) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED
Genomic Order:  5091 Name:  ? AT5G56210
Secondary Identifier:  ? PAC:19669045
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56210 0.5kb upstream 0.5kb upstream 2678 true Chr5: 22750555-22753232 Arabidopsis thaliana
AT5G56210 0.5kb upstream 0.5kb upstream 500 false Chr5: 22752733-22753232 Arabidopsis thaliana
AT5G56210 0.5kb downstream 0.5kb downstream 2678 true Chr5: 22750055-22752732 Arabidopsis thaliana
AT5G56210 0.5kb downstream 0.5kb downstream 500 false Chr5: 22750055-22750554 Arabidopsis thaliana
AT5G56210 1.0kb upstream 1.0kb upstream 3178 true Chr5: 22750555-22753732 Arabidopsis thaliana
AT5G56210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22752733-22753732 Arabidopsis thaliana
AT5G56210 1.0kb downstream 1.0kb downstream 3178 true Chr5: 22749555-22752732 Arabidopsis thaliana
AT5G56210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22749555-22750554 Arabidopsis thaliana
AT5G56210 2.0kb upstream 2.0kb upstream 4178 true Chr5: 22750555-22754732 Arabidopsis thaliana
AT5G56210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22752733-22754732 Arabidopsis thaliana
AT5G56210 2.0kb downstream 2.0kb downstream 4178 true Chr5: 22748555-22752732 Arabidopsis thaliana
AT5G56210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22748555-22750554 Arabidopsis thaliana
AT5G56210 5.0kb upstream 5.0kb upstream 7178 true Chr5: 22750555-22757732 Arabidopsis thaliana
AT5G56210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22752733-22757732 Arabidopsis thaliana
AT5G56210 5.0kb downstream 5.0kb downstream 7178 true Chr5: 22745555-22752732 Arabidopsis thaliana
AT5G56210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22745555-22750554 Arabidopsis thaliana
AT5G56210 10.0kb upstream 10.0kb upstream 12178 true Chr5: 22750555-22762732 Arabidopsis thaliana
AT5G56210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22752733-22762732 Arabidopsis thaliana
AT5G56210 10.0kb downstream 10.0kb downstream 12178 true Chr5: 22740555-22752732 Arabidopsis thaliana
AT5G56210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22740555-22750554 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377566 5261 Brassicaceae View MSA
123838806 5264 Brassicales-Malvales View MSA
124342230 5266 SBM View MSA
124238840 5268 Malvidae View MSA
124061399 5270 Rosid View MSA
123751814 5271 Pentapetalae View MSA
122794604 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.952        
cufflinks 10.301        
cufflinks 14.941        
cufflinks 11.547        
cufflinks 15.947       High
cufflinks 7.588       Low

0 Strain