Gene : CBL2 A. thaliana TAIR10
Primary Identifier:  ? AT5G55990 Defline:  (1 of 2) PTHR23056//PTHR23056:SF44 - CALCINEURIN B // CALCINEURIN B-LIKE PROTEIN 2
Genomic Order:  5068 Name:  ? AT5G55990
Secondary Identifier:  ? PAC:19666685
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55990 0.5kb upstream 0.5kb upstream 2904 true Chr5: 22670952-22673855 Arabidopsis thaliana
AT5G55990 0.5kb upstream 0.5kb upstream 500 false Chr5: 22670952-22671451 Arabidopsis thaliana
AT5G55990 0.5kb downstream 0.5kb downstream 2904 true Chr5: 22671452-22674355 Arabidopsis thaliana
AT5G55990 0.5kb downstream 0.5kb downstream 500 false Chr5: 22673856-22674355 Arabidopsis thaliana
AT5G55990 1.0kb upstream 1.0kb upstream 3404 true Chr5: 22670452-22673855 Arabidopsis thaliana
AT5G55990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22670452-22671451 Arabidopsis thaliana
AT5G55990 1.0kb downstream 1.0kb downstream 3404 true Chr5: 22671452-22674855 Arabidopsis thaliana
AT5G55990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22673856-22674855 Arabidopsis thaliana
AT5G55990 2.0kb upstream 2.0kb upstream 4404 true Chr5: 22669452-22673855 Arabidopsis thaliana
AT5G55990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22669452-22671451 Arabidopsis thaliana
AT5G55990 2.0kb downstream 2.0kb downstream 4404 true Chr5: 22671452-22675855 Arabidopsis thaliana
AT5G55990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22673856-22675855 Arabidopsis thaliana
AT5G55990 5.0kb upstream 5.0kb upstream 7404 true Chr5: 22666452-22673855 Arabidopsis thaliana
AT5G55990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22666452-22671451 Arabidopsis thaliana
AT5G55990 5.0kb downstream 5.0kb downstream 7404 true Chr5: 22671452-22678855 Arabidopsis thaliana
AT5G55990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22673856-22678855 Arabidopsis thaliana
AT5G55990 10.0kb upstream 10.0kb upstream 12404 true Chr5: 22661452-22673855 Arabidopsis thaliana
AT5G55990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22661452-22671451 Arabidopsis thaliana
AT5G55990 10.0kb downstream 10.0kb downstream 12404 true Chr5: 22671452-22683855 Arabidopsis thaliana
AT5G55990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22673856-22683855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373169 5261 Brassicaceae View MSA
123839474 5264 Brassicales-Malvales View MSA
124349243 5266 SBM View MSA
124240824 5268 Malvidae View MSA
124063353 5270 Rosid View MSA
123746694 5271 Pentapetalae View MSA
122792524 5272 Eudicot View MSA
122051437 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.431       High
cufflinks 12.83        
cufflinks 16.708        
cufflinks 11.9        
cufflinks 14.416        
cufflinks 12.747        

0 Strain