Gene : AT5G56075 A. thaliana TAIR10
Defline:  (1 of 4) PTHR11538//PTHR11538:SF42 - PHENYLALANYL-TRNA SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  5077
Name:  ? AT5G56075 Secondary Identifier:  ? PAC:19670403
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G56075 0.5kb upstream 0.5kb upstream 1554 true Chr5: 22709256-22710809 Arabidopsis thaliana
AT5G56075 0.5kb upstream 0.5kb upstream 500 false Chr5: 22709256-22709755 Arabidopsis thaliana
AT5G56075 0.5kb downstream 0.5kb downstream 1554 true Chr5: 22709756-22711309 Arabidopsis thaliana
AT5G56075 0.5kb downstream 0.5kb downstream 500 false Chr5: 22710810-22711309 Arabidopsis thaliana
AT5G56075 1.0kb upstream 1.0kb upstream 2054 true Chr5: 22708756-22710809 Arabidopsis thaliana
AT5G56075 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22708756-22709755 Arabidopsis thaliana
AT5G56075 1.0kb downstream 1.0kb downstream 2054 true Chr5: 22709756-22711809 Arabidopsis thaliana
AT5G56075 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22710810-22711809 Arabidopsis thaliana
AT5G56075 2.0kb upstream 2.0kb upstream 3054 true Chr5: 22707756-22710809 Arabidopsis thaliana
AT5G56075 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22707756-22709755 Arabidopsis thaliana
AT5G56075 2.0kb downstream 2.0kb downstream 3054 true Chr5: 22709756-22712809 Arabidopsis thaliana
AT5G56075 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22710810-22712809 Arabidopsis thaliana
AT5G56075 5.0kb upstream 5.0kb upstream 6054 true Chr5: 22704756-22710809 Arabidopsis thaliana
AT5G56075 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22704756-22709755 Arabidopsis thaliana
AT5G56075 5.0kb downstream 5.0kb downstream 6054 true Chr5: 22709756-22715809 Arabidopsis thaliana
AT5G56075 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22710810-22715809 Arabidopsis thaliana
AT5G56075 10.0kb upstream 10.0kb upstream 11054 true Chr5: 22699756-22710809 Arabidopsis thaliana
AT5G56075 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22699756-22709755 Arabidopsis thaliana
AT5G56075 10.0kb downstream 10.0kb downstream 11054 true Chr5: 22709756-22720809 Arabidopsis thaliana
AT5G56075 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22710810-22720809 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
122331294 5261 Brassicaceae Singleton cluster - no MSA
123772490 5264 Brassicales-Malvales Singleton cluster - no MSA
124271003 5266 SBM Singleton cluster - no MSA
124127036 5268 Malvidae Singleton cluster - no MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain