Gene : AT5G55860 A. thaliana TAIR10
Defline:  (1 of 13) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  5054
Name:  ? AT5G55860 Secondary Identifier:  ? PAC:19666390
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55860 0.5kb upstream 0.5kb upstream 3362 true Chr5: 22609032-22612393 Arabidopsis thaliana
AT5G55860 0.5kb upstream 0.5kb upstream 500 false Chr5: 22609032-22609531 Arabidopsis thaliana
AT5G55860 0.5kb downstream 0.5kb downstream 3362 true Chr5: 22609532-22612893 Arabidopsis thaliana
AT5G55860 0.5kb downstream 0.5kb downstream 500 false Chr5: 22612394-22612893 Arabidopsis thaliana
AT5G55860 1.0kb upstream 1.0kb upstream 3862 true Chr5: 22608532-22612393 Arabidopsis thaliana
AT5G55860 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22608532-22609531 Arabidopsis thaliana
AT5G55860 1.0kb downstream 1.0kb downstream 3862 true Chr5: 22609532-22613393 Arabidopsis thaliana
AT5G55860 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22612394-22613393 Arabidopsis thaliana
AT5G55860 2.0kb upstream 2.0kb upstream 4862 true Chr5: 22607532-22612393 Arabidopsis thaliana
AT5G55860 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22607532-22609531 Arabidopsis thaliana
AT5G55860 2.0kb downstream 2.0kb downstream 4862 true Chr5: 22609532-22614393 Arabidopsis thaliana
AT5G55860 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22612394-22614393 Arabidopsis thaliana
AT5G55860 5.0kb upstream 5.0kb upstream 7862 true Chr5: 22604532-22612393 Arabidopsis thaliana
AT5G55860 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22604532-22609531 Arabidopsis thaliana
AT5G55860 5.0kb downstream 5.0kb downstream 7862 true Chr5: 22609532-22617393 Arabidopsis thaliana
AT5G55860 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22612394-22617393 Arabidopsis thaliana
AT5G55860 10.0kb upstream 10.0kb upstream 12862 true Chr5: 22599532-22612393 Arabidopsis thaliana
AT5G55860 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22599532-22609531 Arabidopsis thaliana
AT5G55860 10.0kb downstream 10.0kb downstream 12862 true Chr5: 22609532-22622393 Arabidopsis thaliana
AT5G55860 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22612394-22622393 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363039 5261 Brassicaceae View MSA
123834705 5264 Brassicales-Malvales View MSA
124344448 5266 SBM View MSA
124244517 5268 Malvidae View MSA
124065828 5270 Rosid View MSA
123740930 5271 Pentapetalae View MSA
122786226 5272 Eudicot View MSA
122043167 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.313        
cufflinks 14.559        
cufflinks 9.911       Low
cufflinks 17.36       High
cufflinks 11.471        
cufflinks 14.694        

0 Strain