Gene : AT5G55840 A. thaliana TAIR10
Defline:  (1 of 4) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  5050
Name:  ? AT5G55840 Secondary Identifier:  ? PAC:19667837
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55840 0.5kb upstream 0.5kb upstream 5029 true Chr5: 22597538-22602566 Arabidopsis thaliana
AT5G55840 0.5kb upstream 0.5kb upstream 500 false Chr5: 22597538-22598037 Arabidopsis thaliana
AT5G55840 0.5kb downstream 0.5kb downstream 5029 true Chr5: 22598038-22603066 Arabidopsis thaliana
AT5G55840 0.5kb downstream 0.5kb downstream 500 false Chr5: 22602567-22603066 Arabidopsis thaliana
AT5G55840 1.0kb upstream 1.0kb upstream 5529 true Chr5: 22597038-22602566 Arabidopsis thaliana
AT5G55840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22597038-22598037 Arabidopsis thaliana
AT5G55840 1.0kb downstream 1.0kb downstream 5529 true Chr5: 22598038-22603566 Arabidopsis thaliana
AT5G55840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22602567-22603566 Arabidopsis thaliana
AT5G55840 2.0kb upstream 2.0kb upstream 6529 true Chr5: 22596038-22602566 Arabidopsis thaliana
AT5G55840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22596038-22598037 Arabidopsis thaliana
AT5G55840 2.0kb downstream 2.0kb downstream 6529 true Chr5: 22598038-22604566 Arabidopsis thaliana
AT5G55840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22602567-22604566 Arabidopsis thaliana
AT5G55840 5.0kb upstream 5.0kb upstream 9529 true Chr5: 22593038-22602566 Arabidopsis thaliana
AT5G55840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22593038-22598037 Arabidopsis thaliana
AT5G55840 5.0kb downstream 5.0kb downstream 9529 true Chr5: 22598038-22607566 Arabidopsis thaliana
AT5G55840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22602567-22607566 Arabidopsis thaliana
AT5G55840 10.0kb upstream 10.0kb upstream 14529 true Chr5: 22588038-22602566 Arabidopsis thaliana
AT5G55840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22588038-22598037 Arabidopsis thaliana
AT5G55840 10.0kb downstream 10.0kb downstream 14529 true Chr5: 22598038-22612566 Arabidopsis thaliana
AT5G55840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22602567-22612566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361725 5261 Brassicaceae View MSA
123839072 5264 Brassicales-Malvales View MSA
124344810 5266 SBM View MSA
124238568 5268 Malvidae View MSA
124066069 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13        
cufflinks 2.08        
cufflinks 1.998        
cufflinks 2.246       High
cufflinks 1.724       Low
cufflinks 1.994        

0 Strain