Gene : NHX3 A. thaliana TAIR10
Primary Identifier:  ? AT5G55470 Defline:  (1 of 1) PTHR10110//PTHR10110:SF101 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 4
Genomic Order:  5010 Name:  ? AT5G55470
Secondary Identifier:  ? PAC:19668629
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55470 0.5kb upstream 0.5kb upstream 3962 true Chr5: 22469245-22473206 Arabidopsis thaliana
AT5G55470 0.5kb upstream 0.5kb upstream 500 false Chr5: 22472707-22473206 Arabidopsis thaliana
AT5G55470 0.5kb downstream 0.5kb downstream 3962 true Chr5: 22468745-22472706 Arabidopsis thaliana
AT5G55470 0.5kb downstream 0.5kb downstream 500 false Chr5: 22468745-22469244 Arabidopsis thaliana
AT5G55470 1.0kb upstream 1.0kb upstream 4462 true Chr5: 22469245-22473706 Arabidopsis thaliana
AT5G55470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22472707-22473706 Arabidopsis thaliana
AT5G55470 1.0kb downstream 1.0kb downstream 4462 true Chr5: 22468245-22472706 Arabidopsis thaliana
AT5G55470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22468245-22469244 Arabidopsis thaliana
AT5G55470 2.0kb upstream 2.0kb upstream 5462 true Chr5: 22469245-22474706 Arabidopsis thaliana
AT5G55470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22472707-22474706 Arabidopsis thaliana
AT5G55470 2.0kb downstream 2.0kb downstream 5462 true Chr5: 22467245-22472706 Arabidopsis thaliana
AT5G55470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22467245-22469244 Arabidopsis thaliana
AT5G55470 5.0kb upstream 5.0kb upstream 8462 true Chr5: 22469245-22477706 Arabidopsis thaliana
AT5G55470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22472707-22477706 Arabidopsis thaliana
AT5G55470 5.0kb downstream 5.0kb downstream 8462 true Chr5: 22464245-22472706 Arabidopsis thaliana
AT5G55470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22464245-22469244 Arabidopsis thaliana
AT5G55470 10.0kb upstream 10.0kb upstream 13462 true Chr5: 22469245-22482706 Arabidopsis thaliana
AT5G55470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22472707-22482706 Arabidopsis thaliana
AT5G55470 10.0kb downstream 10.0kb downstream 13462 true Chr5: 22459245-22472706 Arabidopsis thaliana
AT5G55470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22459245-22469244 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365820 5261 Brassicaceae View MSA
123827437 5264 Brassicales-Malvales View MSA
124337209 5266 SBM View MSA
124243882 5268 Malvidae View MSA
124062466 5270 Rosid View MSA
123743806 5271 Pentapetalae View MSA
122791321 5272 Eudicot View MSA
122048905 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.017       High
cufflinks 0.649       Low
cufflinks 0.977        
cufflinks 0.646       Low
cufflinks 0.86        
cufflinks 0.895        

0 Strain